GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Vicia faba mRNA, clone: VfFES03J16, unspecified EST.
HX904405.1:70-90

GTGCGGTGGCGCGGCCATTGATGGCGAGGA70TAAAGCAAACAACAGGGATCGTCGGACTAGACGTTGTTCCGAACGCGAGAG

Vicia faba mRNA, clone: VfPES03I18, unspecified EST.
HX908400.1:97-117

GTGCGGTGGCGCGGCCATTGATGGCGAGGA97TAAAGCAAACAACAGGGATCGTCGGACTAGACGTTGTTCCGAACGCGAGAG

Vicia faba mRNA, clone: VfPES08K06, unspecified EST.
HX910327.1:82-102

GTGCGGTGGCGCGGCCATTGATGGCGAGGA82TAAAGCAAACAACAGGGATCGTCGGACTAGACGTTGTTCCGAACGCGAGAG

TSA: Pisum sativum Ps_contig_mira-ass_15847 mRNA sequence.
JI912350.1:121-141

GTGCGGTGGCGCGGCCGTTAATGGCGAAGA121TAAAGCAAACAACAGGGATCGTAGGGCTCGACGTTGTTCCAAACGCGAGGG

Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:5075587-5075607

GGGCGGTGGCGCGGCCATTGATGGCAAAGA5075587TAAAGCAAACAACAGGGATCGTAGGACTCGACGTTGTACCAAATGCTCGAG

Vicia faba genome assembly, chromosome: 5.
OX451740.1:16512266-16512286

ATGCGGTGGCGCGGCCGTTAATGGCGAAGA16512266TAAAGCAAACAACAGGGATCGTAGGACTAGACGTTGTTCCAAACACGAGGG

Trifolium fragiferum genome assembly, chromosome: 1.
OX940789.1:6373544-6373564

GGGCGGTGGCGCGGCCATTGATGGCAAAGA6373544TAAAGCAAACAACAGGGATCGTAGGACTCGACGTCGTACCAAATGCTCGAG

Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:485070892-485070912

GTGCGGTGGCGCGGCCATTGATGGCGAGGA485070892TAAAGCAAACAACAGGGATCGTCGGGCTAGACGTTGTTCCAAACGCGAGAG

Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:878345295-878345315

GTGCGGTGGCGCGGCCGTTAATGGCGAAGA878345295TAAAGCAAACAACAGGGATCGTAGGATTAGACGTTGTTCCCAACGCAAGGG

Lathyrus aphaca genome assembly, chromosome: 1.
OZ014519.1:351331773-351331793

GTGCGGTGGCGCGGCCATTGATGGCAAGAA351331773TAAAGCAAACAACAGGGATCGTTGGGCTAGATGTCGTTCCAAACGCGAGAG

TSA: Lens culinaris contig00488.Lecu mRNA sequence.
JI846779.1:858-878

CTCTCGCGTTTGGAACGACATCTAGCCCAA858CGATCCCTGTTGTTTGCTTTATTCTCGCCATCAATGGCCGCGCCACCGCTC

TSA: Pisum sativum Ps_contig_mira-ass_7132 mRNA sequence.
JI903944.1:363-383

CTCTCGCGTTTGGAACGACATCCAGCCCTA363CGATCCCTGTTGTTTGCTTTATTCTTGCCATCAATGGCCGCGCCACCGCAC

TSA: Pisum sativum contig00368.PisaPYK9 mRNA sequence.
JR951112.1:737-757

CCCTCGCGTTTGGAACAACGTCGAGCCCTA737CGATCCCTGTTGTTTGCTTTATCTTCGCCATTAACGGCCGCGCCACCGCAC

TSA: Vicia faba contig00167.VifaIA mRNA sequence.
JR964365.1:728-748

CTCTCGCGTTCGGAACAACGTCTAGTCCGA728CGATCCCTGTTGTTTGCTTTATCCTCGCCATCAATGGCCGCGCCACCGCAC

Vicia faba genome assembly, chromosome: 1S.
OX451735.1:717038292-717038312

CTCTCGCGTTCGGAACAACGTCTAGTCCGA717038292CGATCCCTGTTGTTTGCTTTATCCTCGCCATCAATGGCCGCGCCACCGCAC

Trifolium subterraneum genome assembly, chromosome: 5.
OX637465.1:21620717-21620737

CTCGTGCATTTGGAACAACGTCTAGACCTA21620717CGATCCCTGTTGTTTGCTTTATCTTTGCCATTAATGGCCTCGCCATCGCCC

Lathyrus aphaca genome assembly, chromosome: 1.
OZ014519.1:738195271-738195291

CTCTCGCGTTGGGAACAACGTCTAATCCTA738195271CGATCCCTGTTGTTTGCTTTATCTTCGCCATCAATGGCCGCGCCACCGCAC

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Debug Info:

0.009 | 0.009 | search_start;
0.362 | 0.354 | search_plus_done; http://172.18.8.135:50400/match?q=TAAAGCAAACAACAGGGATCG&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.064 | search_minus_done; http://172.18.8.135:50400/match?q=CGATCCCTGTTGTTTGCTTTA&k=0&no_gap=0&offset=0&limit=40
0.432 | 0.005 | cgi_end;

Summary:

Results:

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