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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-12 07:13:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:91120992-91121011
CCAAACTTACGGTCAGAAAACTCAATTATC91120992TAACACCAACATGGCCACACACCTGGTATAGAACAAACAATCCGTTGAGA
Acronicta psi genome assembly, chromosome: 7.
OX276475.1:12677891-12677910
TCCCGTGGTCAAACGTACCGGCCATAGATG12677891TAACACCAACATGGCCACACAGGTAGATTCTGAAGGAGTTTTTATTATTT
Terebella lapidaria genome assembly, chromosome: 10.
OX424564.1:2555965-2555984
GCCCATGAAACACTTTAACATGCATCTACA2555965TAACACCAACATGGCCACACCTGTTTACTGTTGGGGAGTCTTGGCACCTC
Arachis hypogaea DNA, clone: AHGS44J22.
DH961597.1:196-215
TCTCAACGGATTGTTTGTTCTATACCAGGT196GTGTGGCCATGTTGGTGTTAGATAATTGAGAGTATCCTATGCATTTTCTG
Terebella lapidaria genome assembly, chromosome: 4.
OX424558.1:27030625-27030644
GAGGTGCCAAGACTCCCCAACAGTAAACAG27030625GTGTGGCCATGTTGGTGTTATGTAGATGCATGTTAAAGTGTTTCATGGGC
Terebella lapidaria genome assembly, chromosome: 5.
OX424559.1:4408563-4408582
GAGGTGCCAAGACTCCCCAACAGTAAACAG4408563GTGTGGCCATGTTGGTGTTATGTAGATGCATGTTAAAGTGTTTCATGGGC
Stomoxys calcitrans genome assembly, chromosome: 2.
OY720436.1:18574542-18574561
TTTGCTATTGGTGGTCGTTATCATTTCTCT18574542GTGTGGCCATGTTGGTGTTATACTGCTGCCGGTGTTTTAGTAGTGTGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAACACCAACATGGCCACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAACACCAACATGGCCACAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.387 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=TAACACCAACATGGCCACAC&k=0&no_gap=0&offset=0&limit=50
0.517 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=GTGTGGCCATGTTGGTGTTA&k=0&no_gap=0&offset=0&limit=47
0.520 | 0.003 | cgi_end;

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