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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 01:43:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BOGHY66TF BOGH Brassica oleracea genomic clone BOGHY66, genomic survey sequence.
BH535387.1:64-84
AAAAACATCAAATCATCAGATCAAATATAA64TAACACTGAAACACATTGGCTTTTTGTACTTACTTGTGATCGACAATTTCA
Brassica napus genome assembly, chromosome: C07.
HG994371.1:54425318-54425338
AAAAACATCAAATCATCAGATCAAATATAA54425318TAACACTGAAACACATTGGCTTTTTGTACTTACTTGTGATCGACAATTTCA
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:57012359-57012379
AAAAACATCAAATCATCAGATCAAATATAA57012359TAACACTGAAACACATTGGCTTTTTGTACTTACTTGTGATCGACAATTTCA
Macrobrachium nipponense isolate FS-2020 chromosome 12.
CP062025.1:52596473-52596493
ATCACTTATTAAGGAAGACGTTACGATACT52596473TAACACTGAAACACATTGGCTATTGGCCGACAACACCATATAATTTCTGAT
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:1258798-1258818
TGAAATTGTCGATCACAAGTAAGTACAAAA1258798AGCCAATGTGTTTCAGTGTTATTATATTTGATCTGATGATTTGATGTTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAACACTGAAACACATTGGCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAACACTGAAACACATTGGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.345 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=TAACACTGAAACACATTGGCT&k=0&no_gap=0&offset=0&limit=50
0.440 | 0.095 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCAATGTGTTTCAGTGTTA&k=0&no_gap=0&offset=0&limit=46
0.441 | 0.001 | cgi_end;

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