GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:16:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

AT_SBa0001M08.f AT__SBa Amborella trichopoda genomic clone AT_SBa0001M08 5', genomic survey sequence.
HR617539.1:699-718
TGCTAGAGGAAGAGCCAGGGATTGTGGATA699TAACATGCTTGGTGAGCGAGATGTATATTTTTCCTGCCACTTAACCCAGC
AT_SBa0052C01.f AT__SBa Amborella trichopoda genomic clone AT_SBa0052C01 5', genomic survey sequence.
HR653444.1:701-720
TGCTAGAGGAAGAGCCAGGGATTGTGGATA701TAACATGCTTGGTGAGCGAGTTGTATATTTTTCCTGCCACTTAACCCAGC
Atr02b_72_H01_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122Dhq_P02 5', mRNA sequence.
FD438566.1:183-202
GCTGGGTTAAGTGGCAGGAAAAATATACAA183CTCGCTCACCAAGCATGTTATATCCACAATCCCTGGCTCTTCCTCTAGCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAACATGCTTGGTGAGCGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAACATGCTTGGTGAGCGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.201 | 0.192 | search_plus_done; http://172.18.8.135:50400/match?q=TAACATGCTTGGTGAGCGAG&k=0&no_gap=0&offset=0&limit=50
0.298 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGCTCACCAAGCATGTTA&k=0&no_gap=0&offset=0&limit=48
0.299 | 0.001 | cgi_end;

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