GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 12:22:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Polygonum maritimum genome assembly, chromosome: 8.
OZ002735.1:2830770-2830793
ATTTAACGGCGCCGTTACTTTCAAGGCGAG2830770TAACGGTGACGGAGGTGTTGAAGTACTCGCGGACCTGGGTAATTATCCCATGGG
EG-A11_005_E05 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599978.1:354-377
CGGATGGGATAATCACCCAGGTCAGGGAGT354ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
EoEST0255 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-165 5' similar to Unknown protein [Note: similar to Oryza sativa (japonica cultivar-group) clone Os03g0299600, gen
EL563848.1:466-489
CGGATGGGATAATCACCCAGGTCAGGGAGT466ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
OPMF00546 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 121-G03-T3.seq, mRNA sequence.
EL684309.1:481-504
CGGATGGGATAATCACCCATGTCAGGGAGT481ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGTGACT
OPMF01252 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 133-B03-T3.seq, mRNA sequence.
EL685012.1:478-501
CGGATGGGATAATCACCCACGTCAGGGAGT478ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
OPMF01253 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 133-B04-T3.seq, mRNA sequence.
EL685013.1:475-498
CGGATGGGATAATCACCCAGGTCAGGGAGT475ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
OPSC00425 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 185-E1-T3.seq, mRNA sequence.
EL688670.1:325-348
CGGATGGGATAATCACCCATGTCAGGGAGT325ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCATCCGCCGCCGGCGACT
pOP-EO05422_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05422 5', mRNA sequence.
EY410771.1:249-272
CGGATGGGATAATCACCCAGGTCAGGGAGT249ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
Elaeis guineensis EST, clone (6lib)_isotig32473.
LM627526.1:476-499
CGGATGGGATAATCACCCAGGTCAGGGAGT476ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
TSA: Elaeis guineensis isotig11010.Elguifruit mRNA sequence.
JO098237.1:443-466
CGGATGGGATAATCACCCAGGTCAGGGAGT443ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
Elaeis guineensis large subunit ribosomal protein L17 (RPL17) mRNA, complete cds.
KC146050.1:865-888
CGGATGGGATAATCACCCAGGTCAGGGAGT865ACTTCAACACCTCCGTCACCGTTACCCGCGTCGGCGCAGCCGCCGCCGGCGACT
Polygonum aviculare genome assembly, chromosome: 2.
OW204024.1:37994142-37994165
CCCATGGGATAATTACCCAGGTCCGCGAGT37994142ACTTCAACACCTCCGTCACCGTTACTCGCCTCGGCAGTAACGGCGCCGTTAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAACGGTGACGGAGGTGTTGAAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAACGGTGACGGAGGTGTTGAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=TAACGGTGACGGAGGTGTTGAAGT&k=0&no_gap=0&offset=0&limit=50
0.656 | 0.562 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTCAACACCTCCGTCACCGTTA&k=0&no_gap=0&offset=0&limit=49
0.663 | 0.008 | cgi_end;

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