GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:34:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Elaeis guineensis EST, clone (6lib)_isotig22968.
LM611929.1:537-556
ATGCAGATGTACGCGGATCACAAGCTCACC537TAAGAGAGCACGCAGTTCAGGGGAGGGATAGATATATATACATACATACA
pOP-CNIP00447 CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00447, mRNA sequence.
ES324080.1:267-286
TGTATGTATGTATATATATCTATCCCTCCC267CTGAACTGCGTGCTCTCTTAGGTGAGCTTGTGATCCGCGTACATCTGCAT
pOP-CNIP00447_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00447 5', mRNA sequence.
EY404537.1:267-286
TGTATGTATGTATATATATCTATCCCTCCC267CTGAACTGCGTGCTCTCTTAGGTGAGCTTGTGATCCGCGTACATCTGCAT
TSA: Elaeis guineensis isotig08188.Elguifruit mRNA sequence.
JO095419.1:408-427
TGTATGTATGTATATATATCTATCCCTCCC408CTGAACTGCGTGCTCTCTTAGGTGAGCTTGTGATCCGCGTACATCTGCAT
Calamus travancoricus microsatellite RT22 sequence.
KX495762.1:113-132
TGTCAGTTATATTCCTCGAGAGGAGAATGC113CTGAACTGCGTGCTCTCTTAACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAGAGAGCACGCAGTTCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGAGAGCACGCAGTTCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.186 | 0.178 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGAGAGCACGCAGTTCAG&k=0&no_gap=0&offset=0&limit=50
0.340 | 0.153 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAACTGCGTGCTCTCTTA&k=0&no_gap=0&offset=0&limit=49
0.343 | 0.003 | cgi_end;

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