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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 04:12:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

ss67b12.y1 Gm-c1062 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1062-1464 5' similar to TR:Q9SD10 Q9SD10 HYPOTHETICAL 38.2 KD PROTEIN, mRNA sequence.
BE806616.1:180-199
AATTAGAATCATTATCGTTTATCACACTCC180AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
Glycine max cDNA clone: GMFL01-05-H07, 5'end.
BW653142.1:190-209
AATTAGAATCATTATCGTTTATCACACTCC190AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
Glycine max cDNA clone: GMFL01-43-K20, 5'end.
BW678535.1:206-225
AATTAGAATCATTATCGTTTATCACACTCC206AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
JGI_ACBU905.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU905 5', mRNA sequence.
EH259968.1:85-104
AATTAGAATCATTATCGTTTATCACACTCC85AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
JGI_ACBU3508.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU3508 5', mRNA sequence.
EH260340.1:165-184
AATTAGAATCATTATCGTTTATCACACTCC165AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
JGI_ACBU4083.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU4083 5', mRNA sequence.
EH260964.1:165-184
AATTAGAATCATTATCGTTTATCACACTCC165AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
454GmaGlobSeed58149 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK323517.1:115-134
AATTAGAATCATTATCGTTTATCACACTCC115AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA
454GmaGlobSeed117234 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA sequence.
FK382602.1:115-134
AATTAGAATCATTATCGTTTATCACACTCC115AACAACGCCTTTCGCTCTTACCACCCTCGC
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:6211333-6211352
AATTAGAATCATTATCGTTTATCACACTCC6211333AACAACGCCTTTCGCTCTTACCACCCTCGCGGGTCATTTTCTTGGGAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAAGAGCGAAAGGCGTTGTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGAGCGAAAGGCGTTGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.542 | 1.533 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGAGCGAAAGGCGTTGTT&k=0&no_gap=0&offset=0&limit=50
2.792 | 1.250 | search_minus_done; http://172.18.8.135:50400/match?q=AACAACGCCTTTCGCTCTTA&k=0&no_gap=0&offset=0&limit=50
2.798 | 0.006 | cgi_end;

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