GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:57:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Phalacrocorax carbo genome assembly, chromosome: 3.
OY997603.1:120963724-120963743
TGAGTGATCCAGGGAGCTTTTCCTGTAAAA120963724TAAGCTGCATTTAACCCTTTCATTGGCAGAGAGCTTTCTCCTCTAATAGT
Tridacna gigas genome assembly, chromosome: 17.
OX244044.2:43111542-43111561
CAAAATTTTCATCCTGATCTTTGATCTACA43111542TAAGCTGCATTTAACCCTTTACCACACAATCCCATGTTTTAACGACCCTG
Antitype chi genome assembly, chromosome: 6.
OX375813.1:18941373-18941392
TGTCAAGATTTGGCATAAACCTGTGGTTCC18941373TAAGCTGCATTTAACCCTTTCGATTCCACCTACTTTTCATAGAGCACTTA
Acholoe squamosa genome assembly, chromosome: 7.
OX439041.1:38216851-38216870
TAAATGCTCTGTTTACGCCACACTCATCTG38216851TAAGCTGCATTTAACCCTTTTAAGATAAGGCTACGGTTTGAATATTGTCC
Azorinus chamasolen genome assembly, chromosome: 18.
OY755252.1:46622695-46622714
ATGTTCCAGCTGAGAGAAGTACATCCTGTC46622695TAAGCTGCATTTAACCCTTTCCCTCATATAAATGTCTTTTCACACATAAT
Allygus modestus genome assembly, chromosome: 6.
OY776117.1:99744802-99744821
AAATGAAATTTTTAAATTGTATCCTAAATT99744802TAAGCTGCATTTAACCCTTTTACTGCCGACGTGCGCATTTGCGCACGTCG
Thunnus maccoyii genome assembly, chromosome: 21.
OU343211.1:7592117-7592136
GCAGAGTTGAAGAGAAGATTTATGTAAAAG7592117AAAGGGTTAAATGCAGCTTAATATCTTATTATATTTGTTGACTGTCGAGA
Thunnus albacares genome assembly, chromosome: 21.
OU607612.1:8022956-8022975
GCAGAGTTGAAGAGAAGATTTATGTAAAAG8022956AAAGGGTTAAATGCAGCTTAATATCTTGTTATATTTGTTGACTGTCAAGA
Phalacrocorax aristotelis genome assembly, chromosome: 3.
OX451224.1:8825062-8825081
ACTATTAGAGGAGAAAGCTCTCTGCCAATG8825062AAAGGGTTAAATGCAGCTTATTTTACAGGAAAAGCTCCCTGGATCACTCA
QM0AAA4CH05RM1 CCL1 Citrus clementina genomic clone CCL021P09, genomic survey sequence.
ET070875.1:673-692
CTGAATGGCGGAAAAGACCCAACCAAAAAA673AAAGGGTTAAATGCAGCTTACTGTGTAGT
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:29660241-29660260
CTGAATGGCGGAAAAGACCCAACCAAAAAA29660241AAAGGGTTAAATGCAGCTTACTGTGTAGTTCTTCATCCTTTGGAAAATAG
Azorinus chamasolen genome assembly, chromosome: 9.
OY755243.1:36203014-36203033
TTATTATTTTAACATGAATATTTATGAGCT36203014AAAGGGTTAAATGCAGCTTATCAGTATATTGCATGCTCTATATCCCATTC
Fragum sueziense genome assembly, chromosome: 2.
OY804593.1:42367234-42367253
TTGGACCACTCTAAATGTTGCCCGTTTGGT42367234AAAGGGTTAAATGCAGCTTAAAGAGACACCAATTTCTCATGTTATGTTAA
Fragum sueziense genome assembly, chromosome: 8.
OY804599.1:14195112-14195131
AAGAGACGTCAAAACCAGGTCTTGTTTGGG14195112AAAGGGTTAAATGCAGCTTAATTGTGCAGTTGCATTTAGCTTTCAATTAC
Fragum sueziense genome assembly, chromosome: 10.
OY804601.1:12247086-12247105
AAACACGTCCGAAAAAAATATTTGGCAGTG12247086AAAGGGTTAAATGCAGCTTAAAACAAGCAGCAGTTACGAGGTTTTTGTAA
Ostrinia nubilalis genome assembly, chromosome: 22.
OY979756.1:6812201-6812220
ATCAGTTAAAATATATTTTCTACACCAGTG6812201AAAGGGTTAAATGCAGCTTAAGCGAAGACAAAGCCCAACCGTTTCCTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAGCTGCATTTAACCCTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGCTGCATTTAACCCTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGCTGCATTTAACCCTTT&k=0&no_gap=0&offset=0&limit=50
0.201 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGGGTTAAATGCAGCTTA&k=0&no_gap=0&offset=0&limit=44
0.207 | 0.007 | cgi_end;

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