GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:14:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gobio gobio genome assembly, chromosome: 7.
OX442380.1:8675454-8675473
AGGTGGAGCCGGTGGTGGAGGTGGTTGTGG8675454TAAGTGTGGGGAGGTTGGAAGTGTGCAGGGTTCAGTGACGGCGCTAAAGT
Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:50455363-50455382
ACTGATGGCACAGAAGACCGTGCCAAACCT50455363TAAGTGTGGGGAGGTTGGAATGACTTTCGGTGGTAACAGCTCTCTCTCTC
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:82924746-82924765
ACTGACGGCATGGAAGACCGTGCCAAACCT82924746TAAGTGTGGGGAGGTTGGAATGACTTCCGGAGGTAACATCTCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 9.
OX439255.1:36824392-36824411
CGGAGCACGTCATCACTGAAACATGCACGC36824392TTCCAACCTCCCCACACTTACCACAGCCCCCCCCTCCTCCCCCGCCGGCT
Rutilus rutilus genome assembly, chromosome: 10.
OX637942.1:36501678-36501697
CGGAGCACGTCATCACTGAAACATGCGCGC36501678TTCCAACCTCCCCACACTTACCGCAGCCCCCCCCTCCTCCCCCGCCGGCT
Arachis hypogaea DNA, clone: AHGS46M09.
DH961580.1:601-620
GAGAGAGAGAGCTGTTACCACCGAAAGTCA601TTCCAACCTCCCCACACTTAACGTTTGGCACGGTCTTCTGTGCCATCAGT
AdH1008-CPY2-M11TF AdH1 Arachis duranensis genomic clone AdH1008-CPY2-M11, genomic survey sequence.
FI290155.1:138-157
GAAAGAGAGAGATGTTACCTCCGGAAGTCA138TTCCAACCTCCCCACACTTAAGGTTTGGCACGGTCTTCCATGCCGTCAGT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:72020095-72020114
GAGAGAGAGAGATGTTACCTCCAGAAGTCA72020095TTCCAACCTCCCCACACTTAAGGTTTGGCACGGTCCTCTGTGTCATCAGT
Harpalus rufipes genome assembly, chromosome: 15.
OX596289.1:7623599-7623618
TATTATATTATAGTTTTTGAGAAATCGTCC7623599TTCCAACCTCCCCACACTTACATACATATACACACACACATACATCCAGA
Icerya purchasi genome assembly, chromosome: 2.
OX731681.1:471541892-471541911
CGCAGTTTCGCCGTTATATATTCATATAAA471541892TTCCAACCTCCCCACACTTAAATAAATCACCAATAATCTGTCCCCATTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TAAGTGTGGGGAGGTTGGAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TAAGTGTGGGGAGGTTGGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=TAAGTGTGGGGAGGTTGGAA&k=0&no_gap=0&offset=0&limit=50
0.206 | 0.090 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCAACCTCCCCACACTTA&k=0&no_gap=0&offset=0&limit=47
0.210 | 0.004 | cgi_end;

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