GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 16:24:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 6, clone: LjT05I20, TM0245.
AP006383.1:59525-59544
TGAACATCAACCCTTTATTGCAGAAAATGC59525TACACAACCGTCTAATCGGGAAAGAAACAGGCATGGCAGGGACGACAAGG
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:41457739-41457758
CCTTGTCGTCCCTGCCATGCCTGTTTCTTT41457739CCCGATTAGACGGTTGTGTAGCATTTTCTGCAATAAAGGGTTGATGTTCA
Thysanoteuthis rhombus genome assembly, chromosome: 3.
OY735200.1:40950628-40950647
TTTTTCTTTTCTGGACAGCAATTCATACTG40950628CCCGATTAGACGGTTGTGTAGTTTAGTTAACAAAATTGACCTTACTGTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TACACAACCGTCTAATCGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TACACAACCGTCTAATCGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.089 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=TACACAACCGTCTAATCGGG&k=0&no_gap=0&offset=0&limit=50
0.101 | 0.012 | search_minus_done; http://172.18.8.135:50400/match?q=CCCGATTAGACGGTTGTGTA&k=0&no_gap=0&offset=0&limit=49
0.103 | 0.001 | cgi_end;

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