GGGenome | Results

2025-04-08 15:39:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

GQ0165.B3_C10 GQ016: Primary, secondary SHOOT -N fertil. Treatments Picea glauca cDNA clone GQ0165_C10 5', mRNA sequence.
CO481687.2:449-468

CGGGTGTAAATCTAGGTCGGGGTTTCGAAC449AGGATAGTAATCTGCGTGTAAACGCAAACTCGAAGCCGGTTGATTCAAAC

GQ03801.B7P1_D06 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03801_D06 5', mRNA sequence.
GO367681.1:203-222

CGGGTGTAAATCTCGGTCGGGGTTTCGAAC203AGGATAGTAATCTGCGTGTAAACGCAAACTCGAAGCCGGTTGATTCAAGC

Picea glauca clone GQ03801_D06 mRNA sequence.
BT116520.1:887-906

CGGGTGTAAATCTCGGTCGGGGTTTCGAAC887AGGATAGTAATCTGCGTGTAAACGCAAACTCGAAGCCGGTTGATTCAAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.104 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=TACACGCAGATTACTATCCT&k=0&no_gap=0&offset=0&limit=50
0.257 | 0.153 | search_minus_done; http://172.18.8.135:50400/match?q=AGGATAGTAATCTGCGTGTA&k=0&no_gap=0&offset=0&limit=50
0.259 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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