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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:06:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

JH02014F10 JH-201 Capsicum annuum cDNA 5', mRNA sequence.
CO776559.1:67-86
AACACCAATCAATCCTAAAAATCAAGTCTT67TACAGTGAAATCAATGGCGGGTCGTAGTCAAGAACAAGAACGAGAGCAAC
KS25004D11 KS25 Capsicum annuum cDNA, mRNA sequence.
GD124181.1:248-267
AACACCAATCAATCCTAAAAATCAAGTCTT248TACAGTGAAATCAATGGCGGGTCGTAGTCAAGAACAAGAACGAGAGCAAC
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:156611438-156611457
AACACCAATCAATCCTAAAAATCAAGTCTT156611438TACAGTGAAATCAATGGCGGGTCGTAGTCAAGAACAAGAACGAGAGCAAC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:157447870-157447889
AACACCAATCAATCCTAAAAATCAAGTCTT157447870TACAGTGAAATCAATGGCGGGTCGTAGTCAAGAACAAGAACGAGAGCAAC
TSA: Capsicum annuum MGMT_Contig56, mRNA sequence.
JW050300.1:1381-1400
GTTGCTCTCGTTCTTGTTCTTGACTACGAC1381CCGCCATTGATTTCACTGTAAAGACTTGATTTTTAGGATTGATTGGTGTT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 3.
CP124717.1:69423360-69423379
GTTGCTCTCGTTCTTGTTCTTGACTATGAC69423360CCGCCATTGATTTCACTGTAAAGATTTGATTTTTAGGCCTAATTGGTGTT
Acholoe squamosa genome assembly, chromosome: 14.
OX439048.1:66150265-66150284
TTTTGTGCTTCATGGATTCTTTATAATTTT66150265CCGCCATTGATTTCACTGTACTTGTTGCATGTGATTGTTATCTAATATAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TACAGTGAAATCAATGGCGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TACAGTGAAATCAATGGCGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.287 | 0.278 | search_plus_done; http://172.18.8.135:50400/match?q=TACAGTGAAATCAATGGCGG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=CCGCCATTGATTTCACTGTA&k=0&no_gap=0&offset=0&limit=46
0.406 | 0.002 | cgi_end;

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