GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 03:04:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: NYHA00A37, cultivar: Nakateyutaka.
DE998921.1:141-160
TGAAGTAGACCAAGTTGGTCCCTATTTTAA141TACATGACCCCCACATGAACCTCATTTAACCCCTTTCATCTTTTGAAAAA
Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:92604104-92604123
TGAAGTAGACCAAGTTGGTCCCTATTTTAA92604104TACATGACCCCCACATGAACCTCATTTAACCCCTTTCATCTTTTGAAAAA
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:106508774-106508793
TGAAGTAGACCAAGTTGGTCCCTATTTTAA106508774TACATGACCCCCACATGAACCTCATTTAACCCCTTTCATCTTTTGAAAAA
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:105988072-105988091
TGAAGTAGACCAAGTTGGTCCCTATTTTAA105988072TACATGACCCCCACATGAACCTCATTTAACCCCTTTCATCTTTTGAAAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TACATGACCCCCACATGAAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TACATGACCCCCACATGAAC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.205 | 0.196 | search_plus_done; http://172.18.8.135:50400/match?q=TACATGACCCCCACATGAAC&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=GTTCATGTGGGGGTCATGTA&k=0&no_gap=0&offset=0&limit=46
0.305 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).