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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:39:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

619826 NCCCWA 1RT Oncorhynchus mykiss cDNA clone 1RT142A17_A_A09 5', mRNA sequence.
CA349418.1:320-339
CGGCTGAGGGATTTCATTGGCTGGGTGTGG320TACGAGAGAGAGGTGTTGGTACCCTCTGGATGGGTGTCTGAGGGAACCAG
622522 NCCCWA 1RT Oncorhynchus mykiss cDNA clone 1RT54M11_A_G06 5', mRNA sequence.
CA351452.1:315-334
CGGCTGAGGGATTTCATTGGCTGGGTGTGG315TACGAGAGAGAGGTGTTGGTACCCTCTGGATGGGTGTCTGAGGGAACCAG
638125 NCCCWA 1RT Oncorhynchus mykiss cDNA clone 1RT112N18_D_G09 5', mRNA sequence.
CA363511.1:316-335
CGGCTGAGGGATTTCATTGGCTGGGTGTGG316TACGAGAGAGAGGTGTTGGTACCCTCTGGATGGGTGTCTGAGGGAACCAG
Glyphotaelius pellucidus genome assembly, chromosome: 15.
OW386552.1:25965930-25965949
ACCCCTGCTAAGTCACCAAACGTAGCGAAC25965930TACGAGAGAGAGGTGTTGGTTATCCAATAAATGGTTCCCAGGGCGGCGGT
TSA: Oncorhynchus mykiss 58483.Onmycontig, mRNA sequence.
EZ821817.1:440-459
CTGGTTCCCTCAGACACCCATCCAGAGGGT440ACCAACACCTCTCTCTCGTACCACACCCAGCCAATGAAATCCCTCAGCCG
TSA: Pyrus x bretschneideri Unigene60722_XinShao mRNA sequence.
JR648845.1:121-140
CCTTCTTCGTCCCTCTGATCCCATAAAGCC121ACCAACACCTCTCTCTCGTATAAGTCAGATTCCCATAGAAATTTGCATAA
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:4541730-4541749
CCTTCTTCGTCCCTCTGATCCCATAAAGCC4541730ACCAACACCTCTCTCTCGTAAAAGTCAGACTCCCATAGAAATTTGCATAA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141957.1:4251036-4251055
CCTTCTTCGTCCCTCTGATCCCATAAAGCC4251036ACCAACACCTCTCTCTCGTAAAAGTCAGACTCCCATAGAAATTTGCATAA
Malus hybrid cultivar cultivar Royalty chromosome 5.
CP141974.1:4674828-4674847
CCTTCTTCGTCCCTCTGATCCCATAAAGCC4674828ACCAACACCTCTCTCTCGTAAAAGTCAGACTCCCATAGAAATTTGCATAA
Malus hybrid cultivar cultivar SH6 chromosome 5.
CP143379.1:37347705-37347724
CCTTCTTCGTCCCTCTGATCCCATAAAGCC37347705ACCAACACCTCTCTCTCGTAAAAGTCAGACTCCCATAGAAATTTGCATAA
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:4933876-4933895
CCTTCTTCGTTCCTCTGATCCCATAAAGCC4933876ACCAACACCTCTCTCTCGTAAAAGTCAGACCCCCATATAAATTTGCATAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TACGAGAGAGAGGTGTTGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TACGAGAGAGAGGTGTTGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.238 | 0.230 | search_plus_done; http://172.18.8.135:50400/match?q=TACGAGAGAGAGGTGTTGGT&k=0&no_gap=0&offset=0&limit=50
0.339 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=ACCAACACCTCTCTCTCGTA&k=0&no_gap=0&offset=0&limit=46
0.344 | 0.005 | cgi_end;

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