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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:40:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-26757 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w17c4 5', mRNA sequence.
DV685439.1:222-244
ATCATCCCCATCATCTGAGCGGAGTCTTAA222AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCAAGAAGATG
CGN-29884 Leaf Coffea canephora cDNA clone cccl4c6 5', mRNA sequence.
DV687771.1:391-413
ATCACCACCATCATCTGAGCGGAGTCTTAA391AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCAAGAAGATG
CGN-30525 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w17c4 5', mRNA sequence.
DV688113.1:229-251
ATCATCCCCATCATCTGAGCGGAGTCTTAA229AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCTCATTGTCCTCGAGAAGATG
CGN-32862 Leaf Coffea canephora cDNA clone cccl18e1 5', mRNA sequence.
DV689714.1:289-311
ATCACCACCATCATCTGAGCGGAGTCTTAA289AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG
CGN-33298 Leaf Coffea canephora cDNA clone cccl18e14 5', mRNA sequence.
DV690042.1:523-545
ATCACCACCATCATCTGAGCGGAGTCTTAA523AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCAAGAAGATG
CGN-36273 Leaf Coffea canephora cDNA clone cccl16o1 5', mRNA sequence.
DV692367.1:322-344
ATCACCACCATCATCTGAGCGGAGTCTTAA322AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCAAAAAGATG
CGN-61887 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30n16 5', mRNA sequence.
DV712755.1:666-688
ATCATCCCCATCATCTGAGCGGAGTCTTAA666AAGGAAGATTACGTCAGCGGCTAGGCCTCGTT
CC00-XX-SH3-039-A11-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-039-A11-EM, mRNA sequence.
GT647314.1:356-378
ATCACCACCATCATCTGAGCGGAGTCTTAA356AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG
CA00-XX-SH2-061-B08-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-061-B08-EM, mRNA sequence.
GW440861.1:632-654
ATCATCCCCATCATCTGAGCGGAGTCTTAA632AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG
CA00-XX-SH2-024-H12-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-024-H12-EM, mRNA sequence.
GW441504.1:288-310
ATCATCACCATCATCTGAGCGGAGTCTTAA288AAGGAAGATTACGTCAGCGGCTAGACCTCGTTCCCATTGTCCTCGAGAAGATG
CA00-XX-SH2-011-E03-EM.F Coffea arabica SH2 Coffea arabica cDNA clone CA00-XX-SH2-011-E03-EM, mRNA sequence.
GW447711.1:136-158
ATCATCACCATCATCTGAGCGGAGTCTTAA136AAGGAAGATTACGTCAGCGGCTAGACCTCGTTCCCATTGTCCTCGAGAAGATG
CCES34 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110685.1:660-682
TCAACCACCATCATCTGAGCGGAGTCTTAA660AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG
CCES35 Coffee EST-SSR sequence Coffea canephora STS cDNA, sequence tagged site.
GF110686.1:660-682
TCAACCACCATCATCTGAGCGGAGTCTTAA660AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG
Coffea arabica microsatellite DNA, clone 113-5CTG.
AJ308814.1:108-130
ATCATCCCCATCATCTGAGCGGAGTCTTAA108AAGGAAGATTACGTCAGCGGCTAGGCCTCGTTCCCATTGTCCTCGAGAAGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGCCGCTGACGTAATCTTCCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGCCGCTGACGTAATCTTCCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.176 | 0.167 | search_plus_done; http://172.18.8.135:50400/match?q=TAGCCGCTGACGTAATCTTCCTT&k=0&no_gap=0&offset=0&limit=50
1.078 | 0.903 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGAAGATTACGTCAGCGGCTA&k=0&no_gap=0&offset=0&limit=50
1.088 | 0.010 | cgi_end;

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