GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 12:09:47, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Musa acuminata AAA Group Unigene61375_NK1 mRNA sequence.
JV408895.1:82-101
CGACAGGATGGTGTTTCTGCACAAGCAGTT82TAGCCGGGAATTAGATGTGCCTTCTCTTTGTTTAATGAGGTTATGACACG
TSA: Musa acuminata AAA Group Unigene67956_B1 mRNA sequence.
JV316671.1:229-248
CGTGTCATAACCTCATTAAACAAAGAGAAG229GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCCGTCG
Musa troglodytarum cultivar karat chromosome 4.
CP097506.1:41823892-41823911
CGTGTCATAACCTCATGAAACAAAGAGAAG41823892GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGACG
Musa acuminata subsp. malaccensis isolate AA chromosome 4.
CP126373.1:31803366-31803385
CGTGTCATAACCTCATTAAACAAAGAGAAG31803366GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGTCG
Musa acuminata subsp. malaccensis isolate AA chromosome 15.
CP126384.1:31817499-31817518
CGTGTCATAACCTCATTAAACAAAGAGAAG31817499GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGTCG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:31117717-31117736
CGTGTCATAACCTCATTAAACAAAGAGAAG31117717GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGTCG
Musa schizocarpa genome assembly, chromosome: S04.
LS990918.1:35173168-35173187
CGTGTCATAACCTCATTAAACAAAGAGAAG35173168GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCCGTCG
Musa banksii genome assembly, chromosome: 4.
OZ184655.1:31879041-31879060
CGTGTCATAACCTCATTAAACAAAGAGAAG31879041GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCCGTCA
Musa textilis genome assembly, chromosome: 4.
OZ184667.1:40433771-40433790
CGTGTCATAACCTCATGAAACAAAGAGAAG40433771GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGACG
Musa acuminata var. zebrina genome assembly, chromosome: 4.
OZ184678.1:45122376-45122395
CGTGTCATAACCTCATTAAACAAAGAGAAG45122376GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCCGTCG
Musa hybrid cultivar genome assembly, chromosome: 4.
OZ185483.1:34307925-34307944
CGTGTCATAACCTCATTAAACAAAGAGAAG34307925GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCCGACG
Musa hybrid cultivar genome assembly, chromosome: 4.
OZ185495.1:33328734-33328753
CGTGTCATAACCTCATTAAACAAAGAGAAG33328734GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGTCG
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 4.
OZ193589.1:31868983-31869002
CGTGTCATAACCTCATTAAACAAAGAGAAG31868983GCACATCTAATTCCCGGCTAAACTGCTTGTGCAGAAACACCATCCTGTCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGCCGGGAATTAGATGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGCCGGGAATTAGATGTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.296 | 0.287 | search_plus_done; http://172.18.8.135:50900/match?q=TAGCCGGGAATTAGATGTGC&k=0&no_gap=0&offset=0&limit=50
0.468 | 0.172 | search_minus_done; http://172.18.8.135:50900/match?q=GCACATCTAATTCCCGGCTA&k=0&no_gap=0&offset=0&limit=49
0.476 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).