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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:06:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:3472318-3472336
TGGGCCTTAGGGCCACCAGGCAATTATTAG3472318TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:3621768-3621786
TGGGCCTTAGGGCCACCAGGCAATTATTAG3621768TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Malus domestica genome assembly, chromosome: 2.
OU696678.1:3472256-3472274
TGGGCCTTAGGGCCACCAGGCAATTATTAG3472256TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3701072-3701090
TGGGCCTTAGGGCCACCAGGCAATTATTAG3701072TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Malus domestica genome assembly, chromosome: 2.
OU744954.1:3709938-3709956
TGGGCCTTAGGGCCACCAGGCAATTATTAG3709938TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Malus domestica genome assembly, chromosome: 2.
OU744992.1:3472160-3472178
TGGGCCTTAGGGCCACCAGGCAATTATTAG3472160TAGGGCACACTTGCTGGTCCTGATTAGGGTTTTAGAAGTTGAAATCCCT
Hordeum vulgare genome assembly, chromosome: 1H.
OX460243.1:199362024-199362042
TCGCGAGCATGCCCTGCCCAGGTGTTCTTG199362024TAGGGCACACTTGCTGGTCGGGAGCTGCTTCGGGCTGACGTCTGGGACC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:11908814-11908832
TGGGCCAAATGGCCGCCAGGCAATTATTAG11908814TAGGGCACACTTGCTGGTCCTGTTAGGGTTTTAGAAGTTGAAATCCCTC
Chionomys nivalis genome assembly, chromosome: 1.
OX465448.1:142935262-142935280
GTAGAGCCACACAGTCACGAACCCCACAGA142935262GACCAGCAAGTGTGCCCTAGCCCCTTCTGGGTAGGAGGGTTTGCACACC
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:32588255-32588273
AGGGATTTCAACTTCTAAAACCCTAATCAG32588255GACCAGCAAGTGTGCCCTACTAATAATTGCCTGGTGGCCCTAAGGCCCA
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:34990184-34990202
AGGGATTTCAACTTCTAAAACCCTAATCAG34990184GACCAGCAAGTGTGCCCTACTAATAATTGCCTGGTGGCCCTAAGGCCCA
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:37248440-37248458
AGAGATTTCAACTTCCAAAACCCTAATCAG37248440GACCAGCAAGTGTGCCCTACTAATAATTGCCTGGTGGCCCTATAGACCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGGGCACACTTGCTGGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGGGCACACTTGCTGGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.099 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=TAGGGCACACTTGCTGGTC&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GACCAGCAAGTGTGCCCTA&k=0&no_gap=0&offset=0&limit=42
0.132 | 0.003 | cgi_end;

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