GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-08 15:09:49, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:18663949-18663968
CACGTGATAAAAACCAATGTTTGTCTTGGG18663949TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica napus cultivar Xiang5A chromosome 2.
CP151897.1:17415348-17415367
CACGTGATAAAAACCAATGTTTGTCTTGGG17415348TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica napus cultivar Xiang5A chromosome 12.
CP151907.1:36822084-36822103
CTGCCCAGTTACCCCCATGTTTGTCTTGGG36822084TAGGGTTTCTGACCCGATTGGTCGACCCGAACCACGTGGCTATAAGATCC
Brassica napus genome assembly, chromosome: A02.
HG994356.1:18501068-18501087
CACGTGATAAAAACCAATGTTTGTCTTGGG18501068TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica napus genome assembly, chromosome: C02.
HG994366.1:37062783-37062802
CTGCCCAGTTACCCCCATGTTTGTCTTGGG37062783TAGGGTTTCTGACCCGATTGGTCGACCCGAACCACGTGGCTATAAGATCC
Brassica rapa genome, scaffold: A02.
LR031573.1:17908975-17908994
CACGTGATAAAAACCAATGTTTGTCTTGGG17908975TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:38323780-38323799
CTGCCCAGTTACCCCCATGTTTGTCTTGGG38323780TAGGGTTTCTGACCCGATTGGTCGAGCCGAACCACGTGGCTATAAGATCC
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:17976725-17976744
CACGTGATAAAAACCAATGTTTGTCTTGGG17976725TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Eleocharis quinqueflora genome assembly, chromosome: 9.
OZ060295.1:7478064-7478083
ATTTAGGGTTTTCTGACCCGTTTGGACATC7478064TAGGGTTTCTGACCCGATTGACCTGAGTTGGCCGGCATGGGGGCTGATAC
Brassica oleracea genome assembly, chromosome: 2.
OZ281585.1:39398086-39398105
CTGCCCAGTTACCCCCATGTTTGTCTTGGG39398086TAGGGTTTCTGACCCGATTGGTCGACCCGAACCACGTGGCTATAAGATCC
Brassica oleracea genome assembly, chromosome: 2.
OZ281595.1:40280278-40280297
CTGCCCAGTTACCCCCATGTTTGTCTTGGG40280278TAGGGTTTCTGACCCGATTGGTCGACCCGAACCACGTGGCTATAAGATCC
Brassica rapa subsp. trilocularis genome assembly, chromosome: 2.
OZ282416.1:18523490-18523509
CACGTGATAAAAACCAATGTTTGTCTTGGG18523490TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica oleracea var. botrytis genome assembly, chromosome: 2.
OZ282427.1:43278542-43278561
CTGCCCAGTTACCCCCATGTTTGTCTTGGG43278542TAGGGTTTCTGACCCGATTGGTCGACCCGAACCACGTGGCTATAAGATCC
Brassica rapa subsp. narinosa genome assembly, chromosome: 2.
OZ282443.1:18408346-18408365
CACGTGATAAAAACCAATGTTTGTCTTGGG18408346TAGGGTTTCTGACCCGATTGGTTGACCCGAATCACGTGGCTATAAGATCC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB007I08, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC232447.1:67784-67803
GGATCTTATAGCCACGTGATTCGGGTCAAC67784CAATCGGGTCAGAAACCCTACCCAAGACAAACATTGGTTTTTATCACGTG
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:29590294-29590313
GGATCTTATAGCCACGTGGTTCGGGTCGAC29590294CAATCGGGTCAGAAACCCTACCCAAGACAAACATGGGGGTAACTGGGCAG
Holcus mollis genome assembly, chromosome: 11.
OZ286373.1:104412978-104412997
CTGCCTAGAAACCAAAAATCCCCAAATTTC104412978CAATCGGGTCAGAAACCCTAGAACTACAAATTGGGGAATTTGTTACCAAT
Holcus mollis genome assembly, chromosome: 11.
OZ286373.1:104425284-104425303
CTGCCTAGAAACCAAAAATCCCCAAATTTC104425284CAATCGGGTCAGAAACCCTAGAACTACAAATTGGGGAATTTGTTCCCAAT
Holcus mollis genome assembly, chromosome: 11.
OZ286396.1:108959996-108960015
CTGCCTAGAAACCAAAAATCCCCAAATTTC108959996CAATCGGGTCAGAAACCCTAGAACTACAAATTGGGGAATTTGTTACCAAT
Holcus mollis genome assembly, chromosome: 11.
OZ286396.1:108972302-108972321
CTGCCTAGAAACCAAAAATCCCCAAATTTC108972302CAATCGGGTCAGAAACCCTAGAACTACAAATTGGGGAATTTGTTCCCAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGGGTTTCTGACCCGATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGGGTTTCTGACCCGATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50900/match?q=TAGGGTTTCTGACCCGATTG&k=0&no_gap=0&offset=0&limit=50
0.563 | 0.164 | search_minus_done; http://172.18.8.135:50900/match?q=CAATCGGGTCAGAAACCCTA&k=0&no_gap=0&offset=0&limit=36
0.567 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).