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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:58:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

sf85a03.y1 Gm-c1019 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1019-2885 5', mRNA sequence.
AW277661.1:110-129
CAACAACGTCTCTCTCTGTTACTCTGAAAG110TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
saf37e09.y4 Gm-c1077 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1077-618 5', mRNA sequence.
BI892758.1:49-68
CAACAACGTCTCTCTCTGTTACTCTGAAAG49TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
sai62d11.y1 Gm-c1068 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1068-3238 5', mRNA sequence.
BI893177.1:22-41
GGCTCTCTGTTACTCTGAAAG22TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
sam19f04.y1 Gm-c1068 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1068-5263 5', mRNA sequence.
BM886667.1:46-65
CAACAACGTCTCTCTCTGTTACTCTGAAAG46TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
sat53b07.y2 Gm-c1056 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1056-5054 5', mRNA sequence.
CA782721.1:44-63
CAACAACGTCTCTCTCTGTTACTCTGAAAG44TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
Glycine max cDNA, clone: GMFL02-25-I10, 5'end.
DB964251.1:70-89
CAACAACGTCTCTCTCTGTTACTCTGAAAG70TAGGTGACCATGGAGCATCATCTTCATATGTGTGCCATGATCATTTTGAT
MOPDG46TF MOP Vigna unguiculata cDNA 5', mRNA sequence.
FF544183.1:67-86
CAACAACGTCAGTGTTGGGTACCCGGAAAC67TAGGTGACCATGGAGCATCATGTTTTCTTCATATGTTTGTGTGAACACTT
UCRVU07_CCNP10947_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP10947.b1, mRNA sequence.
FG875852.1:8-27
CGGAAAC8TAGGTGACCATGGAGCATCATGTTTTCTTCATATGTTTGTGTGAACACTT
UCRVU07_CCNP9151_b1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP9151.b1, mRNA sequence.
FG886636.1:45-64
CAACAACGTCAGTGTTGGGTACCCGGAAAC45TAGGTGACCATGGAGCATCATGTTTTCTTCATATGTTTGTGTGAACACTT
TSA: Capra hircus Seqs34442.Cahispleen mRNA sequence.
JO610305.2:907-926
CATAACCTTCGCAGGTTTGCCTTTCACTGG907TAGGTGACCATGGAGCATCAGTGGAATTAAATGCATTGTCACTAACAGGC
TSA: Capra hircus a137031;10.Cahiskin mRNA sequence.
KA324137.1:193-212
CATAACCTTCGCAGGTTTGCCTTTCACTGG193TAGGTGACCATGGAGCATCAGTGGAATTAAATGCATTGTCACTAACAGGC
Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
AP015040.1:33103549-33103568
CAACAACGTCAGTGTTGGGTACCCTGAAAC33103549TAGGTGACCATGGAGCATCATGTTTTCTTCATATGTTTGTGTTCACACCT
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:5692117-5692136
CAACAACGTCAGTGTTGGGTACCCGGAAAC5692117TAGGTGACCATGGAGCATCATGTTTTCTTCATATGTTTGTGTGAACACTT
Sphenostylis stenocarpa genome assembly, chromosome: 5.
OY731402.1:57012203-57012222
CAACAACTTCAGTGTTGGGTATCCTAAAAC57012203TAGGTGACCATGGAGCATCATCATGTTTTCCTCATATGTTTGTGTTGATG
TSA: Capra hircus Seql9612.Cahiliver mRNA sequence.
JO405461.2:56-75
GCCTGTTAGTGACAATGCATTTAATTCCAC56TGATGCTCCATGGTCACCTACCAGTGAAAGGCAAACCTGCGAAGGTTATG
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:21124419-21124438
ATCAAAATGATCATGGCACACATATGAAGA21124419TGATGCTCCATGGTCACCTACTTTCAGAGTAACAGAGAGAGACGTTGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGGTGACCATGGAGCATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGGTGACCATGGAGCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.584 | 0.575 | search_plus_done; http://172.18.8.135:50400/match?q=TAGGTGACCATGGAGCATCA&k=0&no_gap=0&offset=0&limit=50
0.738 | 0.154 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGCTCCATGGTCACCTA&k=0&no_gap=0&offset=0&limit=36
0.740 | 0.002 | cgi_end;

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