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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 02:27:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 23146 from patent US 7750207.
GX329071.1:1161-1180
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG1161TAGTAGTTGGGCGACAGCCTGGGCGCCGCCCCCGCCGCGCAGCAGGCGGC
OGVGT04TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0478B08, genomic survey sequence.
CG452274.1:372-391
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG372TAGTAGTTGGGCGACAGCCTGGGCGCCGCCCCCGCCGCGCAGCAGGCGGC
fsbb001f203e12f0 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone fsbb001f203e12, genomic survey sequence.
CW457454.1:145-164
ATCCGCTGCACCCGCGGGCAGCTGTGGCGG145TAGTAGTTGGGCGACAGCCTGGGCGCTTTCGCTTTCGCCGCCGCCGCTGT
Zea mays full-length cDNA clone ZM_BFb0185P16 mRNA, complete cds.
BT084813.1:657-676
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG657TAGTAGTTGGGCGACAGCCTGGGCGCCGCCCCCGCCGCGCAGCA
Setaria viridis cultivar ME034v chromosome 7.
CP050801.1:21097848-21097867
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG21097848TAGTAGTTGGGCGACAGCCTGGGCGCCTTCGCCGCCGCCGCGCAGGAGGC
Zea mays cultivar LT2357 chromosome 2.
CP116740.1:199174226-199174245
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG199174226TAGTAGTTGGGCGACAGCCTGGGCGCCGCCCCCGCCGCGCAGCAGGCGGC
Sorghum bicolor cultivar Hongyingzi chromosome 6.
CP137830.1:52590939-52590958
ATCCGCTGCACCCGCGGGCAGCTGTGGCGG52590939TAGTAGTTGGGCGACAGCCTGGGCGCTTTCGCTTTCGCCGCCGCCGCTGT
Sorghum bicolor cultivar Huandiaonuo chromosome 6.
CP137840.1:53070921-53070940
ATCCGCTGCACCCGCGGGCAGCTGTGGCGG53070921TAGTAGTTGGGCGACAGCCTGGGCGCTTTCGCTTTCGCCGCCGCCGCTGT
Digitaria exilis genome assembly, chromosome: 7A.
LR994616.1:20242288-20242307
ATCCGCTCCACCCGCGGGCAGCTGTGGCGG20242288TAGTAGTTGGGCGACAGCCTGGGCGCCGCCGCCGCCGCGCAGGAGGCTGC
Cenchrus americanus genome assembly, chromosome: PMC23DB3.
OX387241.1:251308854-251308873
ATCCTCTCCACCCGCGGGCAGCTGCGGCGG251308854TAGTAGTTGGGCGACAGCCTGGGCGCCTTCGCCGCCGCCGCGCAGGAGGC
Phragmites australis genome assembly, chromosome: 7.
OY282618.1:25580372-25580391
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG25580372TAGTAGTTGGGCGACAGCCTGGCCGCCGCCGCGCAGGAGCCTGCGGCGGC
Phragmites australis genome assembly, chromosome: 13.
OY282624.1:19661858-19661877
ATCCGCTCCACGCGCGGGCAGCTGCGGCGG19661858TAGTAGTTGGGCGACAGCCTGGGCGCCGCCGCCGCGCCGGAGGCCGCGGC
Cenchrus americanus genome assembly, chromosome: Pg3.
OZ001399.1:263363027-263363046
ATCCTCTCCACCCGCGGGCAGCTGCGGCGG263363027TAGTAGTTGGGCGACAGCCTGGGCGCCTTCGCCGCCGCCGCGCAGGAGGC
Cenchrus americanus genome assembly, chromosome: Pg3.
OZ001407.1:270838641-270838660
ATCCTCTCCACCCGCGGGCAGCTGCGGCGG270838641TAGTAGTTGGGCGACAGCCTGGGCGCCTTCGCCGCCGCCGCGCAGGAGGC
Sequence 23633 from patent US 7569389.
GP681804.1:423-442
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC423AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 64874 from patent US 7569389.
GP695654.1:217-236
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC217AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 13070 from patent US 7834146.
GX744891.1:286-305
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC286AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
Sequence 13070 from patent US 8106174.
GZ087762.1:286-305
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC286AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
Sequence 5559 from patent US 8299318.
GZ559011.1:244-263
TGCGCGGCGTCGGCGGCGGCCGCGGCGCCC244AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 48010 from patent US 8344211.
GZ673783.1:305-324
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC305AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 75448 from patent US 8344211.
GZ689986.1:278-297
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC278AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 10445 from patent US 8362325.
GZ767213.1:106-125
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC106AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGCAGCGGAT
Sequence 18268 from patent US 8362325.
GZ770177.1:106-125
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC106AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGCAGCGGAT
Sequence 10445 from patent US 9701726.
KH859380.1:106-125
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC106AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGCAGCGGAT
Sequence 18268 from patent US 9701726.
KH862344.1:106-125
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC106AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGCAGCGGAT
Sequence 5559 from patent US 10150971.
MM441052.1:244-263
TGCGCGGCGTCGGCGGCGGCCGCGGCGCCC244AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 5559 from patent US 10947553.
MX448732.1:244-263
TGCGCGGCGTCGGCGGCGGCCGCGGCGCCC244AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Sequence 5559 from patent US 11001852.
MX712719.1:244-263
TGCGCGGCGTCGGCGGCGGCCGCGGCGCCC244AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
SCUTFL3076C07.g Saccharum officinarum FL3 Saccharum hybrid cultivar (mixed) cDNA clone SCUTFL3076C07 5', mRNA sequence.
CA241537.1:152-171
TCCGCCTCCTCCGCGGCGGCGGCAGCGCCC152AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGCGTGGAGCGGAT
SCSBFL1104G10.g FL1 Saccharum hybrid cultivar (mixed) cDNA clone SCSBFL1104G10 5', mRNA sequence.
CA248787.1:109-128
TCCGCCTCCTCCGCGGCGGCGGCAGCGCCC109AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGCGTGGAGCGGAT
HS1_19_E06.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_19_E06_A012 5', mRNA sequence.
CD205948.1:286-305
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC286AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
HS1_49_H07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_49_H07_A012 5', mRNA sequence.
CD210743.1:259-278
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC259AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
CCC1_28_D08.g1_A007 Callus culture/cell suspension Sorghum bicolor cDNA clone CCC1_28_D08_A007 5', mRNA sequence.
CD223525.1:277-296
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC277AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
CCC1_40_D01.g1_A007 Callus culture/cell suspension Sorghum bicolor cDNA clone CCC1_40_D01_A007 5', mRNA sequence.
CD225613.1:279-298
ACAGCGGCGGCGGCGAAAGCGAAAGCGCCC279AGGCTGTCGCCCAACTACTACCGCCACAGCTGCCCGCGGGTGGAGCGGAT
5205_B09_C17 Switchgrass callus cDNA library Panicum virgatum cDNA clone 5205_B09_C17 5', mRNA sequence.
DN150351.1:203-222
ACCGCCGCCTGCGCGGCGGCCGCGGCGCCC203AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
ZM_BFb0216B03.r ZM_BFb Zea mays cDNA 5', mRNA sequence.
DV527844.1:165-184
GCCAACTCCTGCGCGGCGGGGGCGGCGCCC165AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
ZM_BFc0002P05.f ZM_BFc Zea mays cDNA clone ZM_BFc0002P05 3', mRNA sequence.
EE285314.2:26-45
CTGCTGCGCGGCGGGGGCGGCGCCC26AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
2955994 CERES-227 Zea mays cDNA clone 497907 5', mRNA sequence.
FL160564.1:226-245
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCT226AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
2767094 CERES-226 Zea mays cDNA clone 465601 5', mRNA sequence.
FL160565.1:207-226
GCCGCCTGCTGCGCGACGGGGGCGGCGCCC207AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
6858045 CERES-C298 Zea mays cDNA clone 1278659 5', mRNA sequence.
FL160567.1:217-236
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC217AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
2950183 CERES-227 Zea mays cDNA clone 494771 5', mRNA sequence.
FL192743.1:207-226
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC207AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
16637834 CERES-503 Zea mays cDNA clone 1559905 5', mRNA sequence.
FL192744.1:194-213
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC194AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
14850072 CERES-CN31 Zea mays cDNA clone 1456371 5', mRNA sequence.
FL192745.1:214-233
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC214AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
2934867 CERES-227 Zea mays cDNA clone 487026 5', mRNA sequence.
FL192746.1:207-226
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC207AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
OGVGT04TH ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0478B08, genomic survey sequence.
CG452266.1:678-697
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC678AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
ZMMBLf0005M05.f ZMMBLf Zea mays genomic clone ZMMBLf0005M05 5', genomic survey sequence.
DX873488.1:153-172
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC153AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
ZMMBLf0012P04.f ZMMBLf Zea mays genomic clone ZMMBLf0012P04 5', genomic survey sequence.
DX876309.1:138-157
GCCGCCTGCTGCGCGGCGGGAGCGGCGCCC138AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGAAT
Zea mays cultivar B73 chromosome 2 clone CH201-168E22, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces.
AC208617.4:87215-87234
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC87215AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Cenchrus purpureus cultivar elephant grass chromosome A3.
CP053456.1:50946531-50946550
CCTCCTGCGGCGGCGGCGGCGAAGGCGCCC50946531AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGGGTGGAGCGGAT
Zea mays clone 1278659 peroxidase 65 precursor, mRNA, complete cds.
EU952369.1:217-236
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC217AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Zea mays clone 396313 peroxidase 65 precursor, mRNA, complete cds.
EU973295.1:387-406
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC387AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT
Zea mays genome assembly, chromosome: 2.
LR897968.1:42747032-42747051
GCCGCCTGCTGCGCGGCGGGGGCGGCGCCC42747032AGGCTGTCGCCCAACTACTACCGCCGCAGCTGCCCGCGCGTGGAGCGGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGTAGTTGGGCGACAGCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGTAGTTGGGCGACAGCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.401 | 0.392 | search_plus_done; http://172.18.8.135:50400/match?q=TAGTAGTTGGGCGACAGCCT&k=0&no_gap=0&offset=0&limit=50
1.943 | 1.542 | search_minus_done; http://172.18.8.135:50400/match?q=AGGCTGTCGCCCAACTACTA&k=0&no_gap=0&offset=0&limit=36
1.968 | 0.025 | cgi_end;

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