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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:34:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RTMNUT1_10_D01.b1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_10_D01_A029 3', mRNA sequence.
DR178209.1:540-559
AGCTTTATTAACATAAATAATATTAATAAT540TAGTATTAACAAAAGGGCATGTCTCAAAAAACATGATTGTTTCTGAAAGG
li0676588 Radiata pine juvenile latewood cDNA library Pinus radiata cDNA clone 39326 B4, mRNA sequence.
FE520357.1:665-684
AGCTTTATTAACAAAAATAATATTAATAAT665TAGTATTAACAAAAGGGCATGTCTCAAAAAACATGATTGTTTCTGAAAGG
PCO0113.CR_H14 Pco01-Bark-Wounded-Norm (PCO01) Pinus contorta cDNA clone PCO0113_H14 3', mRNA sequence.
GT249412.1:517-536
TTAGCTTTATTAACAAATAATATTAATAAT517TAGTATTAACAAAAGGGCATGTCTCAAAAAACATAATTGTTTCTGAAAGG
Talaromyces funiculosus strain X33 chromosome 1.
CP036223.1:277398-277417
TTAATTTATCCTAGTCCTAGATCATCTGAA277398TAGTATTAACAAAAGGGCATTCTGACAACCCTACTATGTTGAAGCTTACT
Crataegus laevigata genome assembly, chromosome: 15.
OY756952.1:15138531-15138550
AACCCGCAGCATCGTGCGGGGTTAAATTGC15138531TAGTATTAACAAAAGGGCATGTTGAAATTATTTCGTCACCTAAGTAATCT
Phragmites australis genome assembly, chromosome: 1.
OY282612.1:45263434-45263453
TTAATATCTACTCTGTGGTTAGTGCTAGAT45263434ATGCCCTTTTGTTAATACTATATTTTCTATCAAATGTATTTCTTGTCGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TAGTATTAACAAAAGGGCAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TAGTATTAACAAAAGGGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.598 | 0.589 | search_plus_done; http://172.18.8.135:50400/match?q=TAGTATTAACAAAAGGGCAT&k=0&no_gap=0&offset=0&limit=50
0.714 | 0.115 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCCCTTTTGTTAATACTA&k=0&no_gap=0&offset=0&limit=45
0.715 | 0.001 | cgi_end;

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