GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 22:09:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pinus sylvestris EST, clone WZ0APSBA1YP08NM1.
HE628441.1:19-38
GCAGTTCGATAAATTAAC19TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Pinus sylvestris EST, clone WZ0APSBA5YD16NM1.
HE630035.1:7-26
ATTAAC7TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Pinus sylvestris EST, clone WZ0APSBC7YB12NM1.
HE639355.1:7-26
ATTAAG7TATAGATAAACGGGAAATGAACACAAACGGTTACTATAGTTAACTTGTAG
Nephrotoma appendiculata genome assembly, chromosome: 2.
OX371224.1:116653515-116653534
TTCCTCTTTACCTATAAAATAAATAAATTT116653515TATAGATAAACGGGAAATGAAAAGTTGCCGGATACAAGTTACTCTAGTGT
Tenebrio molitor genome assembly, chromosome: 1.
OZ014538.1:4903341-4903360
GAAAGACGGTGAAAATAGGATACAGGAAGA4903341TATAGATAAACGGGAAATGATTTATATGGATAAAAGAGAAAAGAAACTGA
Pinus sylvestris EST, clone WZ0APSBC7YB12FM1.
HE639354.1:405-424
CTACAAGTTAACTATAGTAACCGTTTGTGT405TCATTTCCCGTTTATCTATACTTAATTTATCGAACTGCGTGAGTAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TATAGATAAACGGGAAATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TATAGATAAACGGGAAATGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.378 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=TATAGATAAACGGGAAATGA&k=0&no_gap=0&offset=0&limit=50
0.497 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTTCCCGTTTATCTATA&k=0&no_gap=0&offset=0&limit=45
0.498 | 0.001 | cgi_end;

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