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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 20:42:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:7751540-7751559
ATGATAAATACGCTCCATAATCCGACCAAA7751540TATCCGAGTGCAATGCTGAAAGGAAATGATAGCACATCAGATTCTGTTTT
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:7782895-7782914
ATGATAAATACGCTCCATAATCCGACCAAA7782895TATCCGAGTGCAATGCTGAAAGTAAATGACAGCACATCTGATTCTGTTTC
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:7738367-7738386
ATGATAAATACGCTCCATAATCCGACCAAA7738367TATCCGAGTGCAATGCTGAAAGTAAATGATAGCACATCAGATTCTGTTTT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:7702888-7702907
ATGATAAATACGCTCCATAATCCGACCAAA7702888TATCCGAGTGCAATGCTGAAAGTAAATGATAGCACATCAGATTCTGTTTT
Phragmites australis genome assembly, chromosome: 4.
OY282615.1:44592064-44592083
TGGTGGCCCAGTTTTTCCTGGCTAGGGCCA44592064TATCCGAGTGCAATGCTGAACTGCTGACACTCCCCATAGGCCGTATCTAG
Pholis gunnellus genome assembly, chromosome: 5.
OU342807.1:21073416-21073435
CCAAACTGGCTTAAAAGAGTACCTCACTAA21073416TTCAGCATTGCACTCGGATAACGTTGTCAGACTCACGATGGACAGTTGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATCCGAGTGCAATGCTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATCCGAGTGCAATGCTGAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.338 | 0.329 | search_plus_done; http://172.18.8.135:50400/match?q=TATCCGAGTGCAATGCTGAA&k=0&no_gap=0&offset=0&limit=50
0.458 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=TTCAGCATTGCACTCGGATA&k=0&no_gap=0&offset=0&limit=45
0.458 | 0.001 | cgi_end;

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