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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:26:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

C0250 Pisum sativum shoot apical meristem ESTs Pisum sativum cDNA clone C0250, mRNA sequence.
EX568912.1:68-90
ATCAAGTAGTCTGTGAGGAAGCTTACTCCA68TATCCTGCTGTTCATCCATGGAGTAGTACTGGTAGTGTTGTAAGTGGTGGTGG
Lathyrus sativus genome assembly, chromosome: 7.
OZ012741.1:613725842-613725864
ATCAAGTAGTCTTTGAGGAAGCTTACTCCA613725842TATCCTGCTGTTCATCCATGGAGTAGTACTGGTAGTGTTGTAAGTGGTGGTTG
Lathyrus aphaca genome assembly, chromosome: 6.
OZ014524.1:550470509-550470531
ATCAAGTAGTCTTTGAGGAAGCTTGCTCCA550470509TATCCTGCTGTTCATCCATGGAGTAGTACTGGTAGTGTTGTAAGTGGTAAGGG
TSA: Pisum sativum Ps_contig_mira-ass_19731 mRNA sequence.
JI916127.1:409-431
CCACCACCACTTACAACACTACCAGTACTA409CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
TSA: Pisum sativum Ps_contig_mira-ass_20697 mRNA sequence.
JI917079.1:512-534
CCACCACCACTTACAACACTACCAGTACTA512CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Pisum sativum stamina pistilloidia (Stp) mRNA, complete cds.
AF004843.1:512-534
CCACCACCACTTACAACACTACCAGTACTA512CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:2414610-2414632
CCCCCACTGCCACTGGAACTTACAACAACA2414610CTCCATGGATGAACAGCAGGATATGGAGCAAGCTCCCTCAGAAGCTTCTGGAC
Lotus japonicus proliferating floral organs protein (Pfo) gene, complete cds.
AY156687.1:152-174
CCCCCACTGCCACTGGAACTTACAACAACA152CTCCATGGATGAACAGCAGGATATGGAGCAAGCTCCCTCAGAAGCTTCTGGAC
Pisum sativum Stp-h1 pseudogene, complete sequence.
AY274930.1:414-436
CCACCACCACTTACAACACTACCAGTACTA414CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Pisum sativum Stp-h2 gene, complete cds.
AY274931.1:409-431
CCACCACCACTTACAACACTACCAGTACTA409CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Pisum sativum Stp-h3 gene, complete cds.
AY274932.1:409-431
CCACCACCACTTACAACACTACCAGTACTA409CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Pisum sativum Stp-h4 gene, complete cds.
AY274933.1:413-435
CCACCACCACTTACAACACTACCAGTACTA413CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCACAGACTACTTGAT
Lotus corniculatus var. japonicus UFO-like protein mRNA, complete cds.
AY770394.1:788-810
CCCCCACTGCCACTGGAACTTACAACAACA788CTCCATGGATGAACAGCAGGATATGGAGCAAGCTCCCTCAGAAGCTTCTGGAC
Vicia faba genome assembly, chromosome: 6.
OX451741.1:795658714-795658736
CCACCACCACTTACAACACTACCAGTACTA795658714CTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCAAAGACTACTTGAT
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:92253078-92253100
CCACCACCACTTACAACACTACCAGTACTA92253078CTCCATGGATGAACAGCAGGATATGGAGCAAGCTTCCTCAAAGACTACTTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATCCTGCTGTTCATCCATGGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATCCTGCTGTTCATCCATGGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.271 | 0.262 | search_plus_done; http://172.18.8.135:50400/match?q=TATCCTGCTGTTCATCCATGGAG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCATGGATGAACAGCAGGATA&k=0&no_gap=0&offset=0&limit=47
0.412 | 0.008 | cgi_end;

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