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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 03:16:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Onychomys leucogaster genome assembly, chromosome: 19.
OX460389.1:6207720-6207739
AAACAATTGATTACAAAAGTGTGCTTATGG6207720TATGCCATGTGGCTTCAGTGGGAATGCGGAAGTTAAAACAGAAGCAACAA
Onychomys leucogaster genome assembly, chromosome: 19.
OX460436.1:11242158-11242177
AAACAATTGATTACAAAAGTGTGCTTATGG11242158TATGCCATGTGGCTTCAGTGGGAATGCGGAAGTTAAAAGAGAAGCAACAA
Martes martes genome assembly, chromosome: 9.
OY734071.1:34139238-34139257
CATTGTAATCTGACTGAAGAGACGCGGTTC34139238TATGCCATGTGGCTTCAGTGTTTCCTCTGTTGAGATCCCCTGCCCAGTGT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:32976305-32976324
GCTGGGGTAGCTGAGGGGAACAGTATGATT32976305TATGCCATGTGGCTTCAGTGGCTGCCAAACATTAAGATTTTGCTGGACTT
Malus x domestica clone Florina BAC 36I17, complete sequence.
GU295057.1:69320-69339
GCTGGGGTAGCTGAGGGGAACAGTATGATT69320TATGCCATGTGGCTTCAGTGGCTGCCAAACATTATGATTTTGCTGGACTT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:33934105-33934124
GCTGGGGCAGCTGAGGGGAACAGTATGATT33934105TATGCCATGTGGCTTCAGTGGCTGCCAAACATTATGATTTTGCTGGACTT
Lutra lutra genome assembly, chromosome: 9.
LR738411.1:108717569-108717588
ACACTGGGAAGCGGATCTCAACAGAGGAAA108717569CACTGAAGCCACATGGCATAGAACCGCGTCTCTTCAGTCAGATTACAATG
Meles meles genome assembly, chromosome: 16.
OV277457.1:48005788-48005807
ACACTGGGCAGGGGATCTCAACAGAGGAAA48005788CACTGAAGCCACATGGCATAGAACCGCGTCTCTTCAGTCAGATTACAATG
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:2702732-2702751
AAGTCCAGCAAAATCATAATGTTTGGCAGC2702732CACTGAAGCCACATGGCATAAATCATACTGTTCCCCTCAGCTGCCCCAGC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:2582298-2582317
AAGTCCAGCAAAATCATAATGTTTGGCAGC2582298CACTGAAGCCACATGGCATAAATCATACTGTTCCCCTCAGCTGCCCCAGC
Avena sativa genome assembly, chromosome: 6D.
OU342397.1:192961970-192961989
GATTTGAGATGTTTTGTGTTGAGAAGCTTC192961970CACTGAAGCCACATGGCATATGGGATCTCCCTTGACCAACTAGGTTTCAA
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:3120620-3120639
AAGTCCAGCAAAATCATAATGTTTGGCTGC3120620CACTGAAGCCACATGGCATAAATCATACTGTTCCCCTCAGCTACCCCAGC
Malus domestica genome assembly, chromosome: 2.
OU744543.1:3241830-3241849
AAGTCCAGCAAAATCATAATGTTTGGCAGC3241830CACTGAAGCCACATGGCATAAATCATACTGTTCCCCTCAGCTACCCCAGC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:3289651-3289670
AAGTCCAGCAAAATCATAATGTTTGGCAGC3289651CACTGAAGCCACATGGCATAAATCATACTGTTCCCCTCAGCTACCCCAGC
Avena sativa genome assembly, chromosome: 20.
OV702298.1:200283656-200283675
GATTTGAGATGTTTTGTGTTGAGAAGCTTC200283656CACTGAAGCCACATGGCATATGGGATCTCCCTTGACCAACTAGGTTTCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATGCCATGTGGCTTCAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATGCCATGTGGCTTCAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.419 | 0.409 | search_plus_done; http://172.18.8.135:50400/match?q=TATGCCATGTGGCTTCAGTG&k=0&no_gap=0&offset=0&limit=50
0.505 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=CACTGAAGCCACATGGCATA&k=0&no_gap=0&offset=0&limit=44
0.511 | 0.006 | cgi_end;

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