GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 12:03:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

ICPM2B08 Microsatellite enriched genomic DNA library of pigeonpea Cajanus cajan genomic clone ICPM2B08 5', genomic survey sequence.
FI131422.1:589-608
GGAATTTAGGGCTTGTTTAGCTTTATCTCT589TATGCGGTCTCTCCCAATTCAATTTTGAGTTAATCGAAATCTGGGAGGTC
TSA: Phalaenopsis aphrodite PATC219866 mRNA sequence.
JI815525.1:91-110
GTGAGAGATTTCCTACCTCTAGAATTATAA91GAATTGGGAGAGACCGCATACCTCTCGAATTGTTGATGCTTATCTTTTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TATGCGGTCTCTCCCAATTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TATGCGGTCTCTCCCAATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.128 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=TATGCGGTCTCTCCCAATTC&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=GAATTGGGAGAGACCGCATA&k=0&no_gap=0&offset=0&limit=49
0.157 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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