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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:22:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trachurus trachurus genome assembly, chromosome: 12.
LR991645.1:12282119-12282138
TTAAACTAAATGCTGACATCTGCATGCTAA12282119TATGCTTGGAATGACATGGCGTGTCTTAGCTTTGGCTACTAGCGTGCTAA
Triticum aestivum genome assembly, chromosome: 3D.
LR862516.1:412244836-412244855
ATTTGTCTCACGACATGGACACATCATATG412244836TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR862537.1:414484244-414484263
ATTTGTCTCACGACATGGACAGATCATATG414484244TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR862558.1:417072824-417072843
ATTTGTCTCACGACATGGACACATCATATG417072824TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR865466.1:409588170-409588189
ATTTGTCTCACGACATGGACACATCATATG409588170TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR865487.1:419653535-419653554
ATTTGTCTCACGACATGGACACATCATATG419653535TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR865508.1:417440465-417440484
ATTTGTCTCACGACATGGACACATCATATG417440465TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR865747.1:423663976-423663995
ATTTGTCTCACGACATGGACAGATCATATG423663976TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR865768.1:408868209-408868228
ATTTGTCTCACGACATGGACACATCATATG408868209TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR877317.1:414958091-414958110
ATTTGTCTCACGACATGGACACATCATATG414958091TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
LR878443.1:411067498-411067517
ATTTGTCTCACGACATGGACACATCATATG411067498TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Aegilops sharonensis genome assembly, chromosome: 2S.
LR880967.1:91438150-91438169
TTGGTCTCAGGACATGGACACATGCATACG91438150TATGCTTGGAATGACATGGCATTTTAATTAAAAAATAGAAAAATGATGAG
Aegilops longissima genome assembly, chromosome: 2S.
LR881070.1:70909927-70909946
CTGGTCTCACGACATGGACACATGCATACG70909927TATGCTTGGAATGACATGGCATTTTAATTCAAAAAAAAAGAAAAATGATG
Triticum aestivum genome assembly, chromosome: 3D.
LS992088.1:411349999-411350018
ATTTGTCTCACGACATGGACACATCATATG411349999TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OU015729.1:437626217-437626236
ATTTGTCTCACGACATGGACACATCATATG437626217TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OU343185.1:428270125-428270144
ATTTGTCTCACGACATGGACACATCATATG428270125TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OU963880.1:417450972-417450991
ATTTGTCTCACGACATGGACACATCATATG417450972TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OV100745.1:417117493-417117512
ATTTGTCTCACGACATGGACACATCATATG417117493TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OW530318.1:417117493-417117512
ATTTGTCTCACGACATGGACACATCATATG417117493TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Triticum aestivum genome assembly, chromosome: 3D.
OX637233.1:324579819-324579838
ATTTGTCTCACGACATGGACACATCATATG324579819TATGCTTGGAATGACATGGCATTTGAATTCCAAAAAATTAAAAAAATATC
Secale cereale genome assembly, chromosome: 2R.
LR738710.1:355691168-355691187
CATCATTTTTCTAATTTTTTGAATTAAAAT355691168GCCATGTCATTCCAAGCATACGTATACATGTGTCCATGTCGTGAGACCAA
Populus nigra genome assembly, chromosome: 10.
OX637681.1:16571175-16571194
ACTGCATGTTTTTTGCATCTCTTTTTGATT16571175GCCATGTCATTCCAAGCATAAAAAATTAATACCGAGAATAATTTTTGTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TATGCTTGGAATGACATGGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TATGCTTGGAATGACATGGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.174 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=TATGCTTGGAATGACATGGC&k=0&no_gap=0&offset=0&limit=50
0.294 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=GCCATGTCATTCCAAGCATA&k=0&no_gap=0&offset=0&limit=30
0.296 | 0.002 | cgi_end;

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