GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 09:41:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CHO_OF717xh02r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET810065.1:386-405
GTTTGGAGGCCGAATCACGAGGAAAAGGTT386TATTGGAATAGAGAATTTGCTTGGATTGAGGTAAGTAACTCTTCTAATCT
Thecocarcelia acutangulata genome assembly, chromosome: 4.
OU612097.1:1359401-1359420
AATGTTTATAATATGTGAAAGAGCATCGAC1359401TATTGGAATAGAGAATTTGCTAAATATATATTCGTAGACAATGCCATGGA
Nemoura dubitans genome assembly, chromosome: X.
OV121073.1:58317570-58317589
GCGCTAGAAGGTCTTTTTCACAAAACTGCA58317570TATTGGAATAGAGAATTTGCAGAGGAGGTTTGCAAACAGAAAGTAAATTT
Hypomecis punctinalis genome assembly, chromosome: 8.
OX438802.1:637691-637710
ATTTTTGGTTTTGAATTCCCATATCAAATG637691TATTGGAATAGAGAATTTGCGTCAGTATACAATAGGCTAGATGACTTAAA
Culex pipiens genome assembly, chromosome: 2.
OZ004312.1:8163891-8163910
TTTTTGTTATGGAAGAATAACTCCAACTGT8163891TATTGGAATAGAGAATTTGCAGCAAAGCTAAAAGACACGTGTCGCCACCT
CHO_OF593xh03r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET961709.1:51-70
AGTTTAGAAGTATTACTTACCTCAAACCAT51GCAAATTCTCTATTCCAATATGCCCTTGCCTCGCGAATCGGCCTCTGAAC
Eilema sororculum genome assembly, chromosome: 24.
OU618556.1:16268021-16268040
TCTGCATAGTAAACAATATCGTAGCCGCAT16268021GCAAATTCTCTATTCCAATACAAATTGCATATCAAAAACTTTTACATTGT
Bemisia tabaci genome assembly, chromosome: 8.
OU963869.1:39877347-39877366
AGCACGAAATTCATCAAATTTCAGACACCT39877347GCAAATTCTCTATTCCAATATCCAGCTCGCTAGAGGCCCCTCTCCATCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TATTGGAATAGAGAATTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TATTGGAATAGAGAATTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=TATTGGAATAGAGAATTTGC&k=0&no_gap=0&offset=0&limit=50
0.281 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAATTCTCTATTCCAATA&k=0&no_gap=0&offset=0&limit=45
0.283 | 0.002 | cgi_end;

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