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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:49:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Heterocephalus glaber genome assembly, chromosome: 10.
OX090950.1:19982820-19982839
CTTCAGCATTTTTCTTTATGTTATAATTCT19982820TATTTCTCTGCTGATTCTTCACATCTGGATTTTTCCATTTTTAAAAATCA
Apteryx australis mantelli genome assembly, scaffold: scaffold27.
LK391419.1:33156127-33156146
TAACCACCTAATGAATTCTTTCTGTGGTTT33156127TATTTCTCTGCTGATTCTTCAGCTCAGAGAGCCACAAGCAGGGGTAAGGA
Apteryx australis mantelli genome assembly, scaffold: scaffold27.
LK391419.1:33158912-33158931
TAACCACCTAATGAATTCTTTCTGTGGTTT33158912TATTTCTCTGCTGATTCTTCAGCTCAGAGAGCCACAAGCAGGGGTAAGGA
PM2-ST0303-220401-013-g05 ST0303 Homo sapiens cDNA, mRNA sequence.
BI048333.1:3-22
GG3TATTTCTCTGCTGATTCTTCTAGACTCCACATTCAGTCTCGCGGAGTTGC
GQ02803.B7_I06 GQ028 - Cambium / phloem scrappings (Normalized library) Picea glauca cDNA clone GQ02803_I06 5', mRNA sequence.
EX311797.1:254-273
CAAGAGCCTGATCATGCTGTTATAGCTCGT254TATTTCTCTGCTGATTCTTCTTCTCTGACATCAGACTCCAGTTCTGGAGT
Picea glauca clone GQ02803_I06 mRNA sequence.
BT103877.1:254-273
CAAGAGCCTGATCATGCTGTTATAGCTCGT254TATTTCTCTGCTGATTCTTCTTCTCTGACATCAGACTCCAGTTCTGGAGT
Pinus taeda isolate 4207 anonymous locus 0_14140_01 genomic sequence.
FJ054177.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4223 anonymous locus 0_14140_01 genomic sequence.
FJ054178.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4219 anonymous locus 0_14140_01 genomic sequence.
FJ054179.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4213 anonymous locus 0_14140_01 genomic sequence.
FJ054180.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4215 anonymous locus 0_14140_01 genomic sequence.
FJ054181.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4220 anonymous locus 0_14140_01 genomic sequence.
FJ054182.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4221 anonymous locus 0_14140_01 genomic sequence.
FJ054183.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4210 anonymous locus 0_14140_01 genomic sequence.
FJ054184.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4218 anonymous locus 0_14140_01 genomic sequence.
FJ054185.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4206 anonymous locus 0_14140_01 genomic sequence.
FJ054186.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4217 anonymous locus 0_14140_01 genomic sequence.
FJ054187.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4222 anonymous locus 0_14140_01 genomic sequence.
FJ054188.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4214 anonymous locus 0_14140_01 genomic sequence.
FJ054189.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4208 anonymous locus 0_14140_01 genomic sequence.
FJ054190.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4209 anonymous locus 0_14140_01 genomic sequence.
FJ054191.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4212 anonymous locus 0_14140_01 genomic sequence.
FJ054192.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4211 anonymous locus 0_14140_01 genomic sequence.
FJ054193.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus taeda isolate 4216 anonymous locus 0_14140_01 genomic sequence.
FJ054194.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus radiata isolate 4224 anonymous locus 0_14140_01 genomic sequence.
JQ261971.1:137-156
CAAGAGCCTGATCATACTGTTATAGCTCGT137TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGAGT
Pinus lambertiana isolate 4225 anonymous locus 0_14140_01 genomic sequence.
JQ261972.1:143-162
CAAGAGCCTGATCATACTGTTATAGCTCGT143TATTTCTCTGCTGATTCTTCTTCTCTTACATCAGAGTCCAGTTCTGGATT
Methylobacterium sp. C1 chromosome, complete genome.
CP017640.1:5657435-5657454
GTAATAGGCCATATTCTCTCCTATAAATGT5657435TATTTCTCTGCTGATTCTTCAGACAAGATTTGTTGATTGATGAACCAAAC
Podabrus alpinus genome assembly, chromosome: 3.
OW026453.1:102441491-102441510
ATTAGCTGTTTCTTATTATAGAATACTCTT102441491TATTTCTCTGCTGATTCTTCCATGCGGATACCTTCCATAAAGGTATGGGA
Harmothoe impar genome assembly, chromosome: 11.
OX381714.1:58738984-58739003
GGGCCTGACCCGGAATTCTCCGATATAGTT58738984TATTTCTCTGCTGATTCTTCATCTAGGGGGTCTGGGTACCCTTTTCCTGC
Heterocephalus glaber genome assembly, chromosome: 10.
OX090918.1:38374804-38374823
TGATTTTTAAAAATGGAAAAATCCAGATGT38374804GAAGAATCAGCAGAGAAATAAGAATTATAACATAAAGAAAAATGCTGAAG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001077.1:76404348-76404367
TGATTTTTAAAAATGGAAAAATCCAGATGT76404348GAAGAATCAGCAGAGAAATAAGAATTATAACATAAAGAAAAATGCTGAAG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001120.1:75866224-75866243
TGATTTTTAAAAATGGAAAAATCCAGATGT75866224GAAGAATCAGCAGAGAAATAAGAATTATAACATAAAGAAAAATGCTGAAG
RTPQ1_2_A12.b2_A032 Roots treated with paraquat Pinus taeda cDNA clone RTPQ1_2_A12_A032 3', mRNA sequence.
CX712355.1:338-357
ACTCCAGAACTGGACTCTGATGTAAGAGAA338GAAGAATCAGCAGAGAAATAACGAGCTATAACAGTATGATCAGGCTCTTG
RTMNUT1_33_F12.b1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_33_F12_A029 3', mRNA sequence.
DR180538.1:298-317
ACTCCAGAACTGGACTCTGATGTAAGAGAA298GAAGAATCAGCAGAGAAATAACGAGCTATAACAGTATGATCAGGCTCTTG
TSA: Larix kaempferi PEMC14978.Lakaproemb mRNA sequence.
JR144842.1:445-464
ACTCCAGAACTGGAGTCTGATGTCAAAGAA445GAAGAATCAGCAGAGAAATAACGAGCTATAACAGCATGATCAGGCTCTTG
Methylobacterium sp. XJLW chromosome, complete sequence.
CP016429.1:1389423-1389442
GTTTGGTTCATCAATCAACAAATCTTGTCT1389423GAAGAATCAGCAGAGAAATAACATTTATAGGAGAGAATATGGCCTATTAC
Methylobacterium tardum strain DSM 19566 chromosome, complete genome.
CP097484.1:3568559-3568578
GTTTGGTTCATCAATCAACAAATCTTGTCT3568559GAAGAATCAGCAGAGAAATAACATTTATAGGAGAGAATATGGCCTATTAC
Grapholita molesta isolate lab01 chromosome gm03.
CP053122.1:13694129-13694148
CGCCCGCCTAATGGTGGCTTTGAGGCAGCA13694129GAAGAATCAGCAGAGAAATATGCGAAGTTAATGCGGATCGGAGTCGCGTG
Lypha dubia genome assembly, chromosome: 4.
OX371263.1:28708073-28708092
TAAAGACAATTTTGTATCTTTTTCTGTTGA28708073GAAGAATCAGCAGAGAAATAAAAAAAAAAAAAACATGAAAGCATTTATTA
Harmothoe impar genome assembly, chromosome: 5.
OX381708.1:1894221-1894240
GCAGGAAAAGGGTACCCAGACCCCCTAGAT1894221GAAGAATCAGCAGAGAAATAAACTATATCGGAGAATTCCGGGTCAGGCCC
Cantharis flavilabris genome assembly, chromosome: 1.
OX424435.1:43027602-43027621
GTTGAGATAAATTAACTGGTACATAAATGT43027602GAAGAATCAGCAGAGAAATAAATTTTCAAACAAAAAGTAATTTATTATTA
Dryomyza anilis genome assembly, chromosome: 1.
OX638130.1:8916419-8916438
TGGAAAAGTAAAACTTAAGCGACTTGAAAT8916419GAAGAATCAGCAGAGAAATATCGCTGATAAAGGGGCTTGGCTGCCTCTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TATTTCTCTGCTGATTCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TATTTCTCTGCTGATTCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.237 | 0.228 | search_plus_done; http://172.18.8.135:50400/match?q=TATTTCTCTGCTGATTCTTC&k=0&no_gap=0&offset=0&limit=50
0.401 | 0.164 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGAATCAGCAGAGAAATA&k=0&no_gap=0&offset=0&limit=21
0.409 | 0.009 | cgi_end;

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