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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:27:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

KR 1020110025451-A/26: A Method for Identifying Barley Varieties using Molecular Markers.
DI185943.1:1-21
1TCAAAAGTTTCGTTCCAAATA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
HG994374.1:446187337-446187357
TAGTAATATTTCAATCATTTCAGATAAATT446187337TCAAAAGTTTCGTTCCAAATATATTTTCCCAATGAACCACTCAGAATCCAG
Helicoverpa zea isolate GA-R chromosome 18.
CP089905.1:4949076-4949096
AGTTTGAGACGACTGTTTACATTTTTTTTT4949076TCAAAAGTTTCGTTCCAAATAGCTTGACGCCAAAATATTTGATGTGGTATT
Neria commutata genome assembly, chromosome: 1.
OY735245.1:56287500-56287520
GAAGCAGCTAACAACAAGCGCAAAAGAATT56287500TCAAAAGTTTCGTTCCAAATAAAAGCAAGAAACTGCACGCAATAAGCCGAA
Cartodere bifasciata genome assembly, chromosome: 5.
OY987197.1:9576954-9576974
ACAAAACATGTGACACTGACATAAAGTAGT9576954TCAAAAGTTTCGTTCCAAATAAGCTACTAGAAGAAAAATCAGTGGCGTACT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR824632.1:485193417-485193437
CTGGATTCTGAGTGGTTCATTGGGAAAATA485193417TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828101.2:498347677-498347697
CTGGATTCTGAGTGGTTCATTGGGAAAATA498347677TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828115.1:477201126-477201146
CTGGATTCTGAGTGGTTCATTGGGAAAATA477201126TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828139.1:519990211-519990231
CTGGATTCTGAGTGGTTCATTGGGAAAATA519990211TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828146.2:486735017-486735037
CTGGATTCTGAGTGGTTCATTGGGAAAATA486735017TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828153.1:463499494-463499514
CTGGATTCTGAGTGGTTCATTGGGAAAATA463499494TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828160.1:497726209-497726229
CTGGATTCTGAGTGGTTCATTGGGAAAATA497726209TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828174.1:489264865-489264885
CTGGATTCTGAGTGGTTCATTGGGAAAATA489264865TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828188.1:488961779-488961799
CTGGATTCTGAGTGGTTCATTGGGAAAATA488961779TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
LR828266.1:483720457-483720477
CTGGATTCTGAGTGGTTCATTGGGAAAATA483720457TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OU015681.1:492452516-492452536
CTGGATTCTGAGTGGTTCATTGGGAAAATA492452516TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OU701463.1:441329425-441329445
CTGGATTCTGAGTGGTTCATTGGGAAAATA441329425TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459902.1:481687308-481687328
CTGGATTCTGAGTGGTTCATTGGGAAAATA481687308TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX459916.1:479916999-479917019
CTGGATTCTGAGTGGTTCATTGGGAAAATA479916999TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459977.1:482917681-482917701
CTGGATTCTGAGTGGTTCATTGGGAAAATA482917681TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX459984.1:485203608-485203628
CTGGATTCTGAGTGGTTCATTGGGAAAATA485203608TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX459998.1:478687814-478687834
CTGGATTCTGAGTGGTTCATTGGGAAAATA478687814TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX460033.1:478506264-478506284
CTGGATTCTGAGTGGTTCATTGGGAAAATA478506264TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460054.1:480288630-480288650
CTGGATTCTGAGTGGTTCATTGGGAAAATA480288630TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460067.1:482416866-482416886
CTGGATTCTGAGTGGTTCATTGGGAAAATA482416866TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460075.1:482564054-482564074
CTGGATTCTGAGTGGTTCATTGGGAAAATA482564054TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460096.1:484538378-484538398
CTGGATTCTGAGTGGTTCATTGGGAAAATA484538378TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460110.1:485874186-485874206
CTGGATTCTGAGTGGTTCATTGGGAAAATA485874186TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460124.1:486172771-486172791
CTGGATTCTGAGTGGTTCATTGGGAAAATA486172771TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460159.1:480445050-480445070
CTGGATTCTGAGTGGTTCATTGGGAAAATA480445050TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460173.1:488486487-488486507
CTGGATTCTGAGTGGTTCATTGGGAAAATA488486487TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460180.1:480666398-480666418
CTGGATTCTGAGTGGTTCATTGGGAAAATA480666398TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460201.1:485274736-485274756
CTGGATTCTGAGTGGTTCATTGGGAAAATA485274736TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460222.1:483017770-483017790
CTGGATTCTGAGTGGTTCATTGGGAAAATA483017770TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460243.1:487383461-487383481
CTGGATTCTGAGTGGTTCATTGGGAAAATA487383461TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460264.1:483590940-483590960
CTGGATTCTGAGTGGTTCATTGGGAAAATA483590940TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX460306.1:484950651-484950671
CTGGATTCTGAGTGGTTCATTGGGAAAATA484950651TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638749.1:481573098-481573118
CTGGATTCTGAGTGGTTCATTGGGAAAATA481573098TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 1H.
OX638791.1:484960693-484960713
CTGGATTCTGAGTGGTTCATTGGGAAAATA484960693TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638805.1:487046623-487046643
CTGGATTCTGAGTGGTTCATTGGGAAAATA487046623TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA
Hordeum vulgare genome assembly, chromosome: 1H.
OX638819.1:479481315-479481335
CTGGATTCTGAGTGGTTCATTGGGAAAATA479481315TATTTGGAACGAAACTTTTGAAATTTATCTGAAATGATTGAAATATTACTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAAAAGTTTCGTTCCAAATA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAAAAGTTTCGTTCCAAATA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=TCAAAAGTTTCGTTCCAAATA&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=TATTTGGAACGAAACTTTTGA&k=0&no_gap=0&offset=0&limit=45
0.180 | 0.023 | cgi_end;

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