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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:28:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

KS10029H07 KS10 Capsicum annuum cDNA, mRNA sequence.
CA519768.1:214-235
GAAGTCCTTCTTTCTGGTTTTACAATTAAC214TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
KS24039A06 KS24 Capsicum annuum cDNA, mRNA sequence.
GD121462.1:232-253
GAAGTCCTTCTTTCTGGTTTTACAATTAAC232TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
TSA: Capsicum annuum MA_MegaContig_30843, mRNA sequence.
JW160338.1:303-324
GAAGTCCTTCTTTCTGGTTTTACAATTAAC303TCAACATTACGTCGTGGAACTCACTTAGTTCAATCCTTCTCTGTTGTCTTCC
TSA: Capsicum annuum MGMT_Contig16774, mRNA sequence.
JW067018.1:808-829
GGAAGACAACAGAGAAGGATTGAACTAAGT808GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:161280530-161280551
GGAAGACAACAGAGAAGGATTGAACTAAGT161280530GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:162084530-162084551
GGAAGACAACAGAGAAGGATTGAACTAAGT162084530GAGTTCCACGACGTAATGTTGAGTTAATTGTAAAACCAGAAAGAAGGACTTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAACATTACGTCGTGGAACTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAACATTACGTCGTGGAACTC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.299 | 0.291 | search_plus_done; http://172.18.8.135:50400/match?q=TCAACATTACGTCGTGGAACTC&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTCCACGACGTAATGTTGA&k=0&no_gap=0&offset=0&limit=47
0.406 | 0.002 | cgi_end;

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