GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:40:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 29 from patent US 8309794.
GZ594044.1:395-413
ATAGGGCTAGCAGTGGCTGGAATATTGACA395GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 30 from patent US 8309794.
GZ594045.1:403-421
ATAGGGCTAGCAGTGGCTGGAATATTGACA403GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 31 from patent US 8309794.
GZ594046.1:402-420
ATAGGGCTAGCAGTGGCTGGAATATTGACA402GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 32 from patent US 8309794.
GZ594047.1:403-421
ATAGGGCTAGCAGTGGCTGGAATATTGACA403GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 33 from patent US 8309794.
GZ594048.1:406-424
ATAGGGCTAGCAGTGGCTGGAATATTGACA406GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 34 from patent US 8309794.
GZ594049.1:395-413
ATAGGGCTAGCAGTGGCTGGAATATTGACA395GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 35 from patent US 8309794.
GZ594050.1:395-413
ATAGGGCTAGCAGTGGCTGGAATATTGACA395GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 35 from patent US 8309794.
GZ594050.1:1040-1058
ATAGGGCTAGCAGTGGCTGGAATATTGACA1040GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 36 from patent US 8309794.
GZ594051.1:396-414
ATAGGGCTAGCAGTGGCTGGAATATTGACA396GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 36 from patent US 8309794.
GZ594051.1:1041-1059
ATAGGGCTAGCAGTGGCTGGAATATTGACA1041GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 36 from patent US 8309794.
GZ594051.1:1686-1704
ATAGGGCTAGCAGTGGCTGGAATATTGACA1686GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 37 from patent US 8309794.
GZ594052.1:364-382
ATAGGGCTAGCAGTGGCTGGAATATTGACA364GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 38 from patent US 8309794.
GZ594053.1:414-432
ATAGGGCTAGCAGTGGCTGGAATATTGACA414GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 39 from patent US 8309794.
GZ594054.1:463-481
ATAGGGCTAGCAGTGGCTGGAATATTGACA463GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 40 from patent US 8309794.
GZ594055.1:391-409
ATAGGGCTAGCAGTGGCTGGAATATTGACA391GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 41 from patent US 8309794.
GZ594056.1:391-409
ATAGGGCTAGCAGTGGCTGGAATATTGACA391GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 42 from patent US 8309794.
GZ594057.1:436-454
ATAGGGCTAGCAGTGGCTGGAATATTGACA436GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 43 from patent US 8309794.
GZ594058.1:466-484
ATAGGGCTAGCAGTGGCTGGAATATTGACA466GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Sequence 84 from patent US 8309794.
GZ594079.1:364-382
ATAGGGCTAGCAGTGGCTGGAATATTGACA364GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Trifolium repens isolate ACLI19 chromosome 06_0cc.
CP125846.1:883718-883736
ATAGGGCTAGCAGTGGCTGGAATATTGACC883718GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA
Trifolium repens putative oleosin mRNA, complete cds.
GQ150345.1:428-446
ATAGGGCTAGCAGTGGCTGGAATATTGACA428GCAGATGCTTGCGGGTTGACGGGGCTTATGTCGTTGTCGTGGACCGTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAACCCGCAAGCATCTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAACCCGCAAGCATCTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=TCAACCCGCAAGCATCTGC&k=0&no_gap=0&offset=0&limit=50
0.520 | 0.427 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGATGCTTGCGGGTTGA&k=0&no_gap=0&offset=0&limit=50
0.534 | 0.014 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).