GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 21:52:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thermoclostridium stercorarium subsp. stercorarium DSM 8532 chromosome, complete genome.
CP003992.2:1834186-1834204
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1834186TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Thermoclostridium stercorarium subsp. stercorarium DSM 8532 chromosome, complete genome.
CP004044.1:1834656-1834674
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1834656TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence.
CP011032.1:2582614-2582632
AATAATGGGGCTAAGCCAATTTGTGCCACT2582614TCAACCGACATTATACCGCTGACATAAGTACCGGTACCAAACGCTTTAA
Thermoclostridium stercorarium subsp. thermolacticum DSM 2910 chromosome, complete genome.
CP014672.1:1897101-1897119
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1897101TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Thermoclostridium stercorarium subsp. leptospartum DSM 9219 chromosome, complete genome.
CP014673.1:1887552-1887570
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1887552TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Pseudoalteromonas tunicata strain D2 chromosome 1, complete sequence.
CP031961.1:1885722-1885740
AATAATGGGGCTAAGCCAATTTGTGCCACT1885722TCAACCGACATTATACCGCTGACATAAGTACCGGTACCAAACGCTTTAA
Thermoclostridium stercorarium strain RKWS1 chromosome, complete genome.
CP110889.1:1839713-1839731
AGGGCGCGACCTGCTTCCATCTGGCCTGGA1839713TCAACCGACATTATACCGCTTCTCATGATTTCAGACACATACGCCCCGC
Crataerina pallida genome assembly, chromosome: 3.
OX453291.1:24609367-24609385
TAATGGTTGGGGGAGATTTTTACACCAAAT24609367GCGGTATAATGTCGGTTGAAGATATCACTGTAATAATCTGGCCGTAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAACCGACATTATACCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAACCGACATTATACCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=TCAACCGACATTATACCGC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGTATAATGTCGGTTGA&k=0&no_gap=0&offset=0&limit=43
0.142 | 0.001 | cgi_end;

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