GGGenome | Results

Help | Japanese

2025-04-08 22:15:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

EST683029 normalized cDNA library of onion Allium cepa cDNA clone ACAIC49, mRNA sequence.
CF446684.1:373-393

TGCTTTCTAAATGCATCTTTTTTTCATGTA373TCTGCCAATTGTAGCAGTTGAAGTTCTTTTTTAATCTGTTTTCTCTGCTAT

TSA: Allium cepa CUDHLF2_6420 mRNA sequence.
JR849238.1:541-561

TGCTTTCTAAATGCATCTTTTTTTCATGTA541TCTGCCAATTGTAGCAGTTGAAGTTCTTTTTTAATCTGTTTTCTCTGCTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=TCAACTGCTACAATTGGCAGA&k=0&no_gap=0&offset=0&limit=50
0.173 | 0.068 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGCCAATTGTAGCAGTTGA&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).