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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 15:23:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium subterraneum genome assembly, chromosome: 1.
OX637461.1:15917361-15917380
TTGGAAATATCTGAGTAATTCTTCTGATGT15917361TCAATAATGTCACGGACCCATCGGAAACGTTTAGCTCCGGCGAGGCGGCG
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:109403782-109403801
TTGGCTATGTCAGTGTAATTCTTCTGGTGT109403782TCAATAATGTCACGGACCCATCGGAAGCGCTTAGCTCTGGCGAGGCGGCG
Trifolium repens mRNA, clone: WCC39k05_077, unspecified EST.
FY467967.1:243-262
CGCCGCCTCGCCGGAGCTAAACGTTTCCGA243TGGGTCCGTGACATTATTGAACATCAGAAGAATTACTCAGATATTTCCAA
Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:45809901-45809920
CGCCGCCTCGCCGGAGCTAAACGTTTCCGA45809901TGGGTCCGTGACATTATTGAACATCAGAAGAATTACTCAGATATTTCCAA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:42585995-42586014
CGCCGCCTCGCCGGAGCTAAACGTTTCCGA42585995TGGGTCCGTGACATTATTGAACATCAGAAGAATTACTCAGATATTTCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAATAATGTCACGGACCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAATAATGTCACGGACCCA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.107 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=TCAATAATGTCACGGACCCA&k=0&no_gap=0&offset=0&limit=50
0.237 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=TGGGTCCGTGACATTATTGA&k=0&no_gap=0&offset=0&limit=48
0.239 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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