GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-29 15:32:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VES06A21.
HX944363.1:121-140
AAAGCATGAGAATAAAATATAACACATTAA121TCAATCCCGACACAAAATGAAAGGCTAACTCAACTCCAAAAGTATCCAAA
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:29155904-29155923
AAAGCATGAGAATAAAATATAACACATTAA29155904TCAATCCCGACACAAAATGAAAGGCTAACTCAACTCCAAAAGTATCCAAA
Mercurialis annua genome assembly, chromosome: LG6.
OW569316.1:18344239-18344258
AAATCAAATGGTTGAACCACAAAAATCAAC18344239TCAATCCCGACACAAAATGAATCAGACCATTACACCGATCAGAAAATTTG
Mercurialis annua genome assembly, chromosome: LG6.
OW569316.1:17552857-17552876
CAAATTTTCTGATCGGTGTAATGGTCTGAT17552857TCATTTTGTGTCGGGATTGAGTTGATTTTTGTGGTTCAACCATTTGATTT
Nephrotoma appendiculata genome assembly, chromosome: 2.
OX371224.1:87144720-87144739
TATGTACGAAATACCAGGTACGTCAATTTT87144720TCATTTTGTGTCGGGATTGATGTCTCTCATTTTGCAAACCATTCAAAAAT
Pyrausta purpuralis genome assembly, chromosome: 24.
OZ001666.1:10036732-10036751
ATGTCAAAGTCAGGAACTTTGTCTTTACAT10036732TCATTTTGTGTCGGGATTGAGGCGTCAGGGAGGCATTCTCGGACCATGAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAATCCCGACACAAAATGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAATCCCGACACAAAATGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.192 | 0.184 | search_plus_done; http://172.18.8.135:50400/match?q=TCAATCCCGACACAAAATGA&k=0&no_gap=0&offset=0&limit=50
0.209 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TCATTTTGTGTCGGGATTGA&k=0&no_gap=0&offset=0&limit=47
0.211 | 0.002 | cgi_end;

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