GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 02:34:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Viscum album genome assembly, chromosome: 10_4.
OY728166.1:130386083-130386102
GATCAACAAAAGTATGTCCTTTAGGGATGG130386083TCAATTCCTCTAGTGTGTGTTCGGTGGTAGCATGAGAATATCTTTGAGAG
Meta bourneti genome assembly, chromosome: X1.
OW119933.1:33002961-33002980
ATATCTAATAAAAATGATACATTTAATATT33002961TCAATTCCTCTAGTGTGTGTTTCATTGTGCTCACACGAAGGTGTATTAGT
Nowickia ferox genome assembly, chromosome: 3.
OW387025.1:46221287-46221306
AGAATTTAATTTTTATGTTTTTTTCTTCAG46221287TCAATTCCTCTAGTGTGTGTTTAACCAACCAAATAATGGGTTTCCCATGG
Tipula vernalis genome assembly, chromosome: 3.
OY282560.1:26386688-26386707
TTGAGTGGGATCATAACCACGTAACGACCA26386688TCAATTCCTCTAGTGTGTGTGAACATAAAAATATCTTCAGCTCGTTGTTC
Citrus reshni microsatellite DNA, locus mCrCIR07D06.
FR677581.1:303-322
AGAGAGAGATCGAGTTCAAGTTAAATACAA303ACACACACTAGAGGAATTGAATAATGTTTAATGTGCAAGTGTTATCATCA
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:993265810-993265829
TTCTCATGGAGATTCTGATAATTCCACCGA993265810ACACACACTAGAGGAATTGATTGCCAAAAAGGGGTCCTTTTATATCGATC
Viscum album genome assembly, chromosome: B1.
OY728167.1:254138228-254138247
CTCTCCTATAGATTCTCGTTTTGCTACCAG254138228ACACACACTAGAGGAATTGACTACTCACAAATTATCATCTCGTATAGATC
Citrus sinensis genome assembly, chromosome: 8.
OY754325.1:23466261-23466280
TGTGTGTGATCGAGTTCAAGTTAAATACAA23466261ACACACACTAGAGGAATTGAATAATGTTTAATGTGCAAGTGTTATCATCA
Nowickia ferox genome assembly, chromosome: 1.
OW387023.1:67074964-67074983
AGCTGACATTGTATTAGATAGGCTAGTTAA67074964ACACACACTAGAGGAATTGACTGAAGAAAAAAACATAAAAATTAAATTCT
Nowickia ferox genome assembly, chromosome: 2.
OW387024.1:42905948-42905967
AGCTGATATCGTATTGGATAGACTAGTTAA42905948ACACACACTAGAGGAATTGACTAAAGAAAAAACATAAAAATTATATTCTT
Nowickia ferox genome assembly, chromosome: 3.
OW387025.1:46222897-46222916
AGCTGACATCGTATTAGATAGGTTGGTTAA46222897ACACACACTAGAGGAATTGACTGAAGAAAATAACATAAAAATTAAATTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAATTCCTCTAGTGTGTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAATTCCTCTAGTGTGTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=TCAATTCCTCTAGTGTGTGT&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=ACACACACTAGAGGAATTGA&k=0&no_gap=0&offset=0&limit=46
0.119 | 0.005 | cgi_end;

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