GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 08:43:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:46995833-46995852
AGTAACCAAATGTACCAAGCACTCTAGCAG46995833TCACATAGGTTTCATGGCCATCTGGCATTAACTTTGCAAGCCCAAAATCC
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:44883632-44883651
AGTAACCAAATGTACCAAGCACTCTAGCAG44883632TCACATAGGTTTCATGGCCATCTGGCATTAACTTTGCAAGCCCAAAATCC
Siphonodentalium dalli isolate Sc116.8C chromosome I.
CP136061.1:111140923-111140942
GTAACCTCATTCGGTTCCAGAGATATAAAT111140923TGGCCATGAAACCTATGTGAATTTGGTTCCTTTGAGTACCAACTGACCAC
Siphonodentalium dalli isolate Sc116.8C chromosome VI.
CP136066.1:178406836-178406855
ACCCATTCCTTTGGTTCCAGAGATATAAAC178406836TGGCCATGAAACCTATGTGAATTTTTGTTCCTTGGCGTATCTACTGGGCG
Siphonodentalium dalli isolate Sc116.8C chromosome IX.
CP136069.1:36429723-36429742
TTGGTGTAAATTCCTTCCAGAGAGATAACA36429723TGGCCATGAAACCTATGTGACTTTGTTCCGTGGAGAATTAACCGGTCACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCACATAGGTTTCATGGCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACATAGGTTTCATGGCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.099 | search_plus_done; http://172.18.8.135:50400/match?q=TCACATAGGTTTCATGGCCA&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TGGCCATGAAACCTATGTGA&k=0&no_gap=0&offset=0&limit=48
0.139 | 0.002 | cgi_end;

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