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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:04:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 5 from patent US 5756324.
AR009601.1:479-498
ATATTAGATTAGACCACTTCTTTTCTATGA479TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Sequence 8 from patent US 5756324.
AR009604.1:488-507
ATATTAGATTAGACCACTTCTTTTCTATGA488TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Sequence 5 from patent US 5633438.
I44061.1:479-498
ATATTAGATTAGACCACTTCTTTTCTATGA479TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Sequence 8 from patent US 5633438.
I44064.1:488-507
ATATTAGATTAGACCACTTCTTTTCTATGA488TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:8133748-8133767
ATATTAGATTAGACCACTTCTTTTCTATGA8133748TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:146270903-146270922
CAAGTGGAACTCTAACTTATACCCTACACC146270903TCACCAAGGACCTCAACACTAGTCATCATACAACCATACATTCCCAACTC
Brassica napus genome assembly, chromosome: A01.
HG994355.1:8282575-8282594
ATATTAGATTAGACCACTTCTTTTCTATGA8282575TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:12942124-12942143
ATATTAGATTAGATCACTTCTTTTCTATGA12942124TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Avena insularis genome assembly, chromosome: 7D.
OU342351.1:126821577-126821596
ACTCTAATGACTTCAACATCTTCAGCATGT126821577TCACCAAGGACCTCAACACTTGGATACCACTAAGGACTACAAGAGAGACA
Brassica napus pollen-specific protein Bnm1 (Bnm1) gene, complete cds.
U86642.1:468-487
ATATTAGATTAGACCACTTCTTTTCTATGA468TCACCAAGGACCTCAACACTTGTCACGACATAGCTCAATTTTCTAAACAA
Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:106899676-106899695
GAGTTGGGAATGTATGGTTGTATGATGACT106899676AGTGTTGAGGTCCTTGGTGAGGTGTAGGGTATAAGTTAGAGTTCCACTTG
Potentilla anserina genome assembly, chromosome: 3.
OW176983.1:32019250-32019269
GAATTCATGTGTTTTTCAAGTTTTAGTTGT32019250AGTGTTGAGGTCCTTGGTGATGATCATTAAGATGAAAGACACTTATTACG
Lineus longissimus genome assembly, chromosome: 2.
OU342993.1:21635162-21635181
AGCCTCTAACGAATTAGCAACAGTAATGGC21635162AGTGTTGAGGTCCTTGGTGAAAACGGCAGCCGCAAGACCATAAGATGTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCACCAAGGACCTCAACACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACCAAGGACCTCAACACT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.252 | 0.244 | search_plus_done; http://172.18.8.135:50400/match?q=TCACCAAGGACCTCAACACT&k=0&no_gap=0&offset=0&limit=50
0.372 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=AGTGTTGAGGTCCTTGGTGA&k=0&no_gap=0&offset=0&limit=40
0.374 | 0.002 | cgi_end;

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