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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:33:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 2215 from patent US 7960612.
GY262013.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 9640 from patent US 7960612.
GY267687.1:88-107
ACCGCCACATCCCAATCTCCCGCCATTTGT88TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
Sequence 9842 from patent US 7960612.
GY267889.1:162-181
ACCGCCACATCCCCATCTCCCGCCATTTGG162TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 2191 from patent US 8030546.
GY455975.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 5055 from patent US 8030546.
GY457329.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 15762 from patent US 8030546.
GY467987.1:88-107
ACCGCCACATCCCAATCTCCCGCCATTTGT88TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
Sequence 16109 from patent US 8030546.
GY468334.1:162-181
ACCGCCACATCCCCATCTCCCGCCATTTGG162TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 197 from Patent EP2046111.
HI284340.1:142-161
ACCGCCACATCCCCATCTCCCGCCATTTGT142TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 200 from Patent EP2046111.
HI284343.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 197 from patent US 8927811.
HK353358.1:142-161
ACCGCCACATCCCCATCTCCCGCCATTTGT142TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 200 from patent US 8927811.
HK353359.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 197 from Patent EP2471355.
JA834321.1:142-161
ACCGCCACATCCCCATCTCCCGCCATTTGT142TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 200 from Patent EP2471355.
JA834324.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 2191 from patent US 10597667.
MO967128.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 5055 from patent US 10597667.
MO968482.1:3-22
GT3TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Sequence 15762 from patent US 10597667.
MO979140.1:88-107
ACCGCCACATCCCAATCTCCCGCCATTTGT88TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
Sequence 16109 from patent US 10597667.
MO979487.1:162-181
ACCGCCACATCCCCATCTCCCGCCATTTGG162TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Ea0002G03f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0002G03f, mRNA sequence.
BE051923.2:90-109
ACCGCCACATCCCCGTCTCCCGCCATTTGT90TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Ea0004E08f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0004E08f, mRNA sequence.
BE053572.2:77-96
ACCGCCACATCCCCGTGGCCCGCCATTTGT77TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Ea0010D12f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ea0010D12f, mRNA sequence.
BG440805.1:90-109
ACCGCCACATCCCCGTCTCCCGCCATTTGT90TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Eb0033F01f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0033F01f, mRNA sequence.
BG446323.1:45-64
ACCGCCACATCCCCGTCTCCCGCCATTTGT45TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Eb0042K16f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0042K16f, mRNA sequence.
BG447405.1:116-135
ACCGCCACATCCCCGTCTCCCGCCATTTGT116TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Ed0003D02f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0003D02f, mRNA sequence.
BQ401417.1:116-135
ACCGCCACATCCCCGTCTCCCGCCATTTGT116TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GA__Ed0041B06f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0041B06f, mRNA sequence.
BQ411597.1:32-51
TTCGGCACGAGCTTGTCTCCCGCCATTTGT32TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACTTCATACCCAC
GR__Ea45A02.r GR__Ea Gossypium raimondii cDNA clone GR__Ea45A02 3', mRNA sequence.
CO081139.1:142-161
ACCGCCACATCCCCATCTCCCGCCATTTGT142TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
GR__Ea09E16.f GR__Ea Gossypium raimondii cDNA clone GR__Ea09E16 5', mRNA sequence.
CO089688.1:162-181
ACCGCCACATCCCCATCTCCCGCCATTTGG162TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
EST1061269 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT550629.1:88-107
ACCGCCACATCCCAATCTCCCGCCATTTGT88TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
EST1063190 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT552550.1:92-111
ACCGCCACATCCCCATCTCCCTCCATTTGT92TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
EST1064095 GH_TMO Gossypium hirsutum cDNA, mRNA sequence.
DT553455.1:94-113
ACCGCCACATCCCCATCTCCCTCCATTTGT94TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
UFL_579_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES791173.1:11-30
GGCACGAGGT11TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
UFL_351_92 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES820828.1:41-60
ACCGCCACATCCCCATCTCCCGCCATTTGT41TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
UFL_109_66 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence.
ES844336.1:90-109
ACCGCCACATCCCAATCTCCCGCCATTTGT90TCACCAGCCAATGGACAGTAACCTGCAAACTCAATCCACCCCATACCCAC
EST002900 Gossypium barbadense L. line 3-79 fiber normalized cDNA library Gossypium barbadense cDNA clone 12-C22 5', mRNA sequence.
GR709700.1:92-111
ACCGCCACATCCCCATCTCCCGCCATTTGT92TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Gossypium raimondii isolate D5-4 chromosome D5_07.
CP032559.1:5843553-5843572
ACCGCCACATCCCCATCTCCCGCCATTTGT5843553TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Gossypium herbaceum isolate Zhongcao1 chromosome 7.
CP106693.1:6606533-6606552
ACCGCCACATCCCCGTCTCCCGCCATTTGT6606533TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Gossypium bickii isolate GPG1lz chromosome 7.
CP106719.1:7772314-7772333
ACCGCCACATCCCCATCTCCCGCCATTTGT7772314TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
Gossypium rotundifolium isolate GPK201 chromosome 7.
CP106728.1:9879645-9879664
ACCGCCACATCCCCATCTCCCGCCATTTGT9879645TCACCAGCCAATGGACAGTAACCAGCAAACTCAATCCACCCCATACCCAC
rGB-SNP_Gh_126 rGB-SNP_Gh Gossypium herbaceum genomic, genomic survey sequence.
DX918829.1:363-382
GTGGGTATGGGGTGGATTGAGTTTGCTGGT363TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGACGGGGATGTGGCGGT
rGB-SNP_Ga_126 rGB-SNP_Ga Gossypium arboreum genomic, genomic survey sequence.
DX919447.1:360-379
GTGGGTATGGGGTGGATTGAGTTTGCTGGT360TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGATGGGGATGTGGCGGT
rGB-SNP_Gs_126 rGB-SNP_Gs Gossypium sturtianum genomic, genomic survey sequence.
DX920090.1:363-382
GTGGGTATGGGGTGGATTGAGTTTGCTGGT363TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGATGGGGATGTGGCGGT
rGB-SNP_Gr_126 rGB-SNP_Gr Gossypium raimondii genomic, genomic survey sequence.
DX920715.1:364-383
GTGGGTATGGGGTGGATTGAGTTTGCTGGT364TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGATGGGGATGTGGCGGT
rGB-SNP_Gt_126 rGB-SNP_Gt Gossypium trilobum genomic, genomic survey sequence.
DX921343.1:361-380
GTGGGTATGGGGTGGATTGAGTTTGCTGGT361TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGATGGGGATGTGGCGGT
Gossypium turneri isolate D10-2 chromosome D10_07.
CP032577.1:47967396-47967415
GTGGGTATGGGGTGGATTGAGTTTGCTGGT47967396TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGATGGGGATGTGGCGGT
Gossypium herbaceum isolate GPA1alz chromosome 7.
CP106706.1:95282300-95282319
GTGGGTATGGGGTGGATTGAGTTTGCTGGT95282300TACTGTCCATTGGCTGGTGAACAAATGGCGGGAGACGGGGATGTGGCGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCACCAGCCAATGGACAGTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACCAGCCAATGGACAGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.294 | 1.285 | search_plus_done; http://172.18.8.135:50400/match?q=TCACCAGCCAATGGACAGTA&k=0&no_gap=0&offset=0&limit=50
1.542 | 0.248 | search_minus_done; http://172.18.8.135:50400/match?q=TACTGTCCATTGGCTGGTGA&k=0&no_gap=0&offset=0&limit=13
1.547 | 0.005 | cgi_end;

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