GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:45:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq6.
LJ340245.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq7.
LJ340246.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq9.
LJ340248.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq12.
LJ340251.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq21.
LJ340260.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
TSA: Myrmica sulcinodis mRNA, contig: comp26034_c3_seq24.
LJ340263.1:339-358
TAATGATGCCTCCATTAGCCGCTCGGACGA339TCACCCTTTGATAATGTTCCTGCCGATCATTACATGAACATAAAACTTTC
Shargacucullia verbasci genome assembly, chromosome: 10.
OX387290.1:184007-184026
CCTCCTGCTCGCCACGCTGTTCCTGGTGCG184007TCACCCTTTGATAATGTTCCCCCGTACCGTTACGAGTACAGGACTTCACT
Euplagia quadripunctaria genome assembly, chromosome: 3.
OY982562.1:22175204-22175223
CAGCGACTGACAACGACGCGGCAGGTCCCT22175204TCACCCTTTGATAATGTTCCCCGTCGGGTCCGAGATTAGTGGAGCATCCC
TSA: Cajanus cajan cultivar UPAS 120 contig07713.UPAS mRNA sequence.
EZ625430.1:235-254
GCATCAGCATCAGCATCAGCAGCAGCACAG235GGAACATTATCAAAGGGTGATGAAGACAATGGACGGTGGTGATGATTATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCACCCTTTGATAATGTTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACCCTTTGATAATGTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.249 | 0.240 | search_plus_done; http://172.18.8.135:50400/match?q=TCACCCTTTGATAATGTTCC&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.038 | search_minus_done; http://172.18.8.135:50400/match?q=GGAACATTATCAAAGGGTGA&k=0&no_gap=0&offset=0&limit=42
0.287 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).