GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:22:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pinctada fucata DNA, chromosome 10, nearly complete sequence, Principal Pseudohaplotype.
AP027111.1:39451048-39451067
ATGACTGTTTTGATTCTATGCAGTCATTTT39451048GATGAAGAAAGGTCCGGTGAAATCATTCCAATACCGCCTTGTCGGTTATC
Pinctada fucata DNA, chromosome 10, nearly complete sequence, Alternate Pseudohaplotype.
AP027125.1:40515399-40515418
ATGACTGTTTTGATTCTATGCAGTCATTTT40515399GATGAAGAAAGGTCCGGTGAAATCATTCCAATTCCGTCTTGTTGGATATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCACCGGACCTTTCTTCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACCGGACCTTTCTTCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=TCACCGGACCTTTCTTCATC&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=GATGAAGAAAGGTCCGGTGA&k=0&no_gap=0&offset=0&limit=50
0.105 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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