GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:18:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:218786197-218786218
CGGTGGTTTGCACCGGCCACTTTTATCCTG218786197TCACCGGTTGCTTCTTCACAAAAGGTTGCAATTGAGTGCACACTTCATTGAT
KS09075G10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517217.1:15-36
CTCAATTGCAACCT15TTTGTGAAGAAGCAACCGGTGACAGGATAAAAGTGGCCGGTGCAAACCACCG
TSA: Capsicum annuum CMCs80_70167, mRNA sequence.
JW114750.1:36-57
ATCAATGAAGTGTGCACTCAATTGCAACCT36TTTGTGAAGAAGCAACCGGTGACAGGATAAAAGTGGCCGGTGCAAACCACCG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:34487485-34487506
ATCAATGAAGTGTGCACTCAATTGCAACCT34487485TTTGTGAAGAAGCAACCGGTGACAGGATAAAAGTGGCCGGTGCAAACCACCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCACCGGTTGCTTCTTCACAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCACCGGTTGCTTCTTCACAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=TCACCGGTTGCTTCTTCACAAA&k=0&no_gap=0&offset=0&limit=50
0.167 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGTGAAGAAGCAACCGGTGA&k=0&no_gap=0&offset=0&limit=49
0.169 | 0.002 | cgi_end;

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