GGGenome | Results

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2025-04-05 17:11:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Prunus dulcis DNA, pseudomolecule Pd02.
AP019298.1:439204-439222

TATTACACAGCTAGTTAAGCAGATCCTCCC439204TCACTCTCCGCTGCCACTTCTACTGTTAACCAAAGTTTCTATGGAGACA

TSA: Phyllium philippinicum contig00866.Phphadfe mRNA sequence.
JR894405.1:573-591

TGGAGGAGATAGAAGATCTTCGTAAGAGAA573AAGTGGCAGCGGAGAGTGAGTACCGCAACTCAATGCCTGCGAGCAGTTA

Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:35310038-35310056

GGAGCAATAAGAAAAGGTGACGTGAGTTAG35310038AAGTGGCAGCGGAGAGTGAGATCGAGATCAAGGTGAGAGAGATCGTTAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
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BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=TCACTCTCCGCTGCCACTT&k=0&no_gap=0&offset=0&limit=50
0.148 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=AAGTGGCAGCGGAGAGTGA&k=0&no_gap=0&offset=0&limit=49
0.149 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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