GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 13:39:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 3.
OU383775.1:42223046-42223066
GAGAGAAAATCAGCTGGAGAGGCTAAATGA42223046TCAGCCCATATCAGATCTTGCTCAGAAATCTAATTCAGATTAAGCCATGCA
Nesoenas mayeri genome assembly, chromosome: 3.
OY720058.1:76171265-76171285
TGGCTGAAACAGGTTGGAGAGACTAAATGA76171265TCAGCCCATATCAGATCTTGCTCAGAAAGCTAATTCAGATTAAGCCATGCT
Streptopelia turtur genome assembly, chromosome: 3.
LR594553.2:46453242-46453262
AGCATGGCTTAATCTGAATTAGCTTTCTGA46453242GCAAGATCTGATATGGGCTGATCATTTAGTCTCTCCAACCTGTTTTCTCTC
Solanum melongena mRNA, clone: RBW06G10, 5'end, expressed in root at 3w after germination.
FS052270.1:340-360
CAGATCGGCGGCGAAGTTTAGCAGAGATGG340GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena mRNA, clone: YFR01I20, 5'end, expressed in fruit at 2w after anthesis.
FS094739.1:343-363
CAGATCGGCGGCGAAGTTTAGCAGAGATGG343GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum torvum mRNA, clone: TVR08F03, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS109155.1:340-360
CAGATCGGCGGCGAAGTTTAGTAGAGATGG340GCAAGATCTGATATGGGCTGATTATGGGCCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Lagkada clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296051.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Lagkada clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296052.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Lagkada clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296053.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Lagkada clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296054.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Tsakoniki clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296055.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Tsakoniki clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296056.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar Tsakoniki clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296057.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar EMI clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296058.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar EMI clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296059.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar EMI clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296060.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar CristalF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296061.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar CristalF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296062.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar CristalF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296063.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar CristalF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296064.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SabelleF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296065.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SabelleF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296066.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SabelleF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296067.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SabelleF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296068.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar AngelaF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296069.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar AngelaF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296070.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar AngelaF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296071.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar AngelaF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296072.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar NiloF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296073.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar NiloF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296074.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar NiloF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296075.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar NiloF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296076.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LeticiaF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296077.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LeticiaF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296078.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LeticiaF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296079.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LeticiaF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296080.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar MonarcaF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296081.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar MonarcaF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296082.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar MonarcaF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296083.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LydiaF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296084.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LydiaF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296085.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LydiaF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296086.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LydiaF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296087.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SamanthaF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296088.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SamanthaF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296089.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SamanthaF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296090.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar SamanthaF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296091.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LatoF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296092.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LatoF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296093.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LatoF1 clone plant3 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296094.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LatoF1 clone plant4 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296095.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar LatoF1 clone plant5 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296096.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar BlanchetteF1 clone plant1 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296097.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA
Solanum melongena cultivar BlanchetteF1 clone plant2 p-coumarate 3-hydroxylase (C3H) gene, complete cds.
OP296098.1:330-350
CAGATCGGCGGCGAAGTTTAGCAGAGATGG330GCAAGATCTGATATGGGCTGATTATGGACCTCATTATGTTAAGGTTAGAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAGCCCATATCAGATCTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGCCCATATCAGATCTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGCCCATATCAGATCTTGC&k=0&no_gap=0&offset=0&limit=50
0.562 | 0.445 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGATCTGATATGGGCTGA&k=0&no_gap=0&offset=0&limit=48
0.596 | 0.034 | cgi_end;

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