GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 09:39:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

VCDC4993 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_007_N23 5', mRNA sequence.
JG757311.1:363-382
AGGAATCTGAAGGATCTAGTTGAAGTACCA363TCAGCTGTTTTGACCAGCATGGAGATATTGCCTGCCAAGCGGATGGAAGA
VCDC5095 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_008_C08 5', mRNA sequence.
JG757413.1:363-382
AGGAATCTGAAGGATCTAGTTGAAGTACCA363TCAGCTGTTTTGACCAGCATGGAGATATTGCCTGCCAAGCGGATGGAAGA
VCDC5206 Daucus carota subsp. sativus B493_1-2kb Daucus carota subsp. sativus cDNA clone CAR02_008_H01 5', mRNA sequence.
JG757524.1:363-382
AGGAATCTGAAGGATCTAGTTGAAGTACCA363TCAGCTGTTTTGACCAGCATGGAGATATTGCCTGCCAAGCGGATGGAAGA
Daucus carota subsp. sativus cultivar DH1 chromosome 2.
CP093344.1:31138989-31139008
AGGAATCTAAAGGATTTAGTTGAAGTACCA31138989TCAGCTGTTTTGACCAGCATGGAGGTAGTTATTAACTTCTTTAGCTGGCT
Daucus carota isolate Kuroda chromosome 2.
CP125302.1:29119275-29119294
AGGAATCTGAAGGATCTAGTTGAAGTACCA29119275TCAGCTGTTTTGACCAGCATGGAGGTAGTTATTAACTTCTCTAGCTGGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAGCTGTTTTGACCAGCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGCTGTTTTGACCAGCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.698 | 0.689 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGCTGTTTTGACCAGCAT&k=0&no_gap=0&offset=0&limit=50
0.801 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=ATGCTGGTCAAAACAGCTGA&k=0&no_gap=0&offset=0&limit=45
0.801 | 0.000 | cgi_end;

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