GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:48:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2650565-2650584
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2650565TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2760610-2760629
TTTGAGTCCTTAATTTTTCAATAGAAAAGT2760610TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2748872-2748891
TTTGAGTCCTTAATTTTTCAATAGAAAAGT2748872TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2823529-2823548
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2823529TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2863486-2863505
TTTGAGTCCTTAATTTTCCAATAGAAAAGT2863486TCAGGGGAAAATCGAAAGTGAGGTGAAAGTTCAGGGGTAAACCGACAGTT
Bathymodiolus septemdierum genome assembly, chromosome: 13.
OY726529.1:12350548-12350567
AAAGACATGGATGCAAATGACAGCTGTATT12350548TCAGGGGAAAATCGAAAGTGACGAACAGCGCTCTCATTGTTGTTCTTCAT
Tipula helvola genome assembly, chromosome: 2.
OY744482.1:60057539-60057558
GTAAATCTGTTGAAATGTTACAGTTCCTGA60057539TCAGGGGAAAATCGAAAGTGTTTATTAGTAAGATAGAGAGTTGTATACTA
Bemisia tabaci genome assembly, chromosome: 6.
OU963867.1:14717585-14717604
CTCTCTTCGCTATTGAAGCAGACGTGACCT14717585CACTTTCGATTTTCCCCTGAGAAAAGAGCGATTACAGCTCAAGGAACCCC
Bathymodiolus brooksi genome assembly, chromosome: 10.
OY804584.1:98663513-98663532
ATGAAGAACAACAATGAGAGCGCTGTTCGT98663513CACTTTCGATTTTCCCCTGAAATACAGCTGTCATTTGCATCCATGTCTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TCAGGGGAAAATCGAAAGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGGGGAAAATCGAAAGTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGGGGAAAATCGAAAGTG&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=CACTTTCGATTTTCCCCTGA&k=0&no_gap=0&offset=0&limit=43
0.152 | 0.001 | cgi_end;

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