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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 20:26:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:4500762-4500782
AGTCGTTCCTCAACCTGACACCCATTCAAA4500762TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus 1-aminocyclopropane-1-carboxylic acid synthase (ACS1G) gene, promoter region, 5' UTR, and partial cds.
DQ353947.1:1382-1402
AGTCGTTCCTCGACCTGACACTCATTCAAA1382TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus gynoecious line (FF) 1-aminocyclopropane-1-carboxylate synthase (ACS1G) gene, complete cds.
DQ839406.1:3189-3209
AGTCGTTCCTCGACCTGACACTCATTCAAA3189TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar TH169 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885085.1:38834-38854
AGTCGTTCCTCGACCTGACACTCATTCAAA38834TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WDSGD 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885086.1:38830-38850
AGTCGTTCCTCGACCTGACACTCATTCAAA38830TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WFEJ 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885087.1:38834-38854
AGTCGTTCCTCGACCTGACACTCATTCAAA38834TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WJE F11 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cd
KT885088.1:38920-38940
AGTCGTTCCTCGACCTGACACTCATTCAAA38920TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar TH118FLM 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete c
KT885089.1:38927-38947
AGTCGTTCCTCGACCTGACACTCATTCAAA38927TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WMEJ 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885090.1:38955-38975
AGTCGTTCCTCGACCTGACACTCATTCAAA38955TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WNE F8 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds
KT885091.1:39051-39071
AGTCGTTCCTCGACCTGACACTCATTCAAA39051TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:4501037-4501057
AGTCGTTCCTCAACCTGACACCCATTCAAA4501037TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis melo genomic chromosome, chr_8.
LN713262.1:4501037-4501057
AGTCGTTCCTCAACCTGACACCCATTCAAA4501037TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus gynoecious line (FF) branched-chain amino acid transaminase (BCAT) gene, exons 8 through 10 and partial cds.
DQ839407.1:1225-1245
TCTTGGTAAAATAATGGATTGTGATAAAAA1225GACGAGAGAAGTGGGCACTGATTTGAATGAGTGTCAGGTCGAGGAACGACT
Cucumis sativus branched-chain amino acid transaminase (BCAT) gene, exons 8 through 10 and partial cds.
DQ839408.2:1772-1792
TCTTGGTAAAATAATGGATTGTGATAAAAA1772GACGAGAGAAGTGGGCACTGATTTGAATGAGTGTCAGGTCGAGGAACGACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGTGCCCACTTCTCTCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGTGCCCACTTCTCTCGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.204 | 0.195 | search_plus_done; http://172.18.8.135:50400/match?q=TCAGTGCCCACTTCTCTCGTC&k=0&no_gap=0&offset=0&limit=50
0.318 | 0.114 | search_minus_done; http://172.18.8.135:50400/match?q=GACGAGAGAAGTGGGCACTGA&k=0&no_gap=0&offset=0&limit=38
0.319 | 0.001 | cgi_end;

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