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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-15 12:19:50, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:4500762-4500782
AGTCGTTCCTCAACCTGACACCCATTCAAA4500762TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Citrullus lanatus cultivar Allsugar chromosome 1.
CP155009.1:30810667-30810687
AGTCGTTCCTCAACCTGACACTCATTCAAA30810667TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar Charleston Gray chromosome 1.
CP155142.1:30979150-30979170
AGTCGTTCCTCAACCTGACACTCATTCAAA30979150TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar Calhoun Gray chromosome 1.
CP155153.1:30954583-30954603
AGTCGTTCCTCAACCTGACACTCATTCAAA30954583TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar PKR6 chromosome 1.
CP155164.1:31075737-31075757
AGTCGTTCCTCAACCTGACACTCATTCAAA31075737TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar Sugarlee chromosome 1.
CP155175.1:30875017-30875037
AGTCGTTCCTCAACCTGACACTCATTCAAA30875017TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar ShiHongNo2 chromosome 1.
CP155186.1:30991931-30991951
AGTCGTTCCTCAACCTGACACTCATTCAAA30991931TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar PI 288522 chromosome 1.
CP155197.1:30874697-30874717
AGTCGTTCCTCAACCTGACACTCATTCAAA30874697TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar DaBanHongZiGua chromosome 1.
CP155208.1:30840171-30840191
AGTCGTTCCTCAACCTGACACTCATTCAAA30840171TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar PI 381740 chromosome 1.
CP155219.1:30689754-30689774
AGTCGTTCCTCAACCTGACACTCATTCAAA30689754TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar SanBaiGua chromosome 1.
CP155230.1:30692048-30692068
AGTCGTTCCTCAACCTGACACTCATTCAAA30692048TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar PI 254622 chromosome 1.
CP155241.1:30969436-30969456
AGTCGTTCCTCAACCTGACACTCATTCAAA30969436TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus cultivar HeiShanRen chromosome 1.
CP155252.1:30734719-30734739
AGTCGTTCCTCAACCTGACACTCATTCAAA30734719TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus amarus cultivar PI 296341-FR chromosome 1.
CP155263.1:31433952-31433972
AGTCGTTCCTCAACCTGACACTCATTCAAA31433952TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus amarus cultivar PI 189225 chromosome 1.
CP155274.1:32236523-32236543
AGTCGTTCCTCAACCTGACACTCATTCAAA32236523TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus amarus cultivar RCAT 055816 chromosome 1.
CP155285.1:31731080-31731100
AGTCGTTCCTCAACCTGACACTCATTCAAA31731080TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus amarus cultivar PI 271769 chromosome 1.
CP155296.1:31487426-31487446
AGTCGTTCCTCAACCTGACACTCATTCAAA31487426TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus subsp. mucosospermus cultivar PI 595203 chromosome 1.
CP155307.1:31059964-31059984
AGTCGTTCCTCAACCTGACACTCATTCAAA31059964TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus amarus cultivar PI 482276 chromosome 1.
CP155318.1:31872790-31872810
AGTCGTTCCTCAACCTGACACTCATTCAAA31872790TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus lanatus subsp. mucosospermus cultivar PI 532732 chromosome 1.
CP155329.1:31796857-31796877
AGTCGTTCCTCAACCTGACACTCATTCAAA31796857TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus colocynthis cultivar PI 537300 chromosome 4.
CP155343.1:30997432-30997452
AGTCGTTCCTCAACCTGACACTCATTCAAA30997432TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus colocynthis cultivar PI 525081 chromosome 4.
CP155354.1:30812707-30812727
AGTCGTTCCTCAACCTGACACTCATTCAAA30812707TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus naudinianus cultivar PI 596694M chromosome 4.
CP155365.1:28547152-28547172
AGTCGTTCCTCAACCTGACACTCATTCAAA28547152TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACAAAGA
Citrullus colocynthis cultivar PI 652554 chromosome 4.
CP155376.1:29032129-29032149
AGTCGTTCCTCAACCTGACACTCATTCAAA29032129TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus colocynthis cultivar PI 632755 chromosome 4.
CP155387.1:30854932-30854952
AGTCGTTCCTCAACCTGACACTCATTCAAA30854932TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Citrullus rehmii cultivar PI 670011 chromosome 4.
CP155398.1:32900758-32900778
AGTCGTTCCTCAACCTGACACTCATTCAAA32900758TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACAAAGA
Citrullus ecirrhosus cultivar PI 673135 chromosome 4.
CP155409.1:34374828-34374848
AGTCGTTCCTCAACCTGACACTCATTCAAA34374828TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Cucumis sativus 1-aminocyclopropane-1-carboxylic acid synthase (ACS1G) gene, promoter region, 5' UTR, and partial cds.
DQ353947.1:1382-1402
AGTCGTTCCTCGACCTGACACTCATTCAAA1382TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus gynoecious line (FF) 1-aminocyclopropane-1-carboxylate synthase (ACS1G) gene, complete cds.
DQ839406.1:3189-3209
AGTCGTTCCTCGACCTGACACTCATTCAAA3189TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar TH169 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885085.1:38834-38854
AGTCGTTCCTCGACCTGACACTCATTCAAA38834TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WDSGD 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885086.1:38830-38850
AGTCGTTCCTCGACCTGACACTCATTCAAA38830TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WFEJ 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885087.1:38834-38854
AGTCGTTCCTCGACCTGACACTCATTCAAA38834TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WJE F11 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cd
KT885088.1:38920-38940
AGTCGTTCCTCGACCTGACACTCATTCAAA38920TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar TH118FLM 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete c
KT885089.1:38927-38947
AGTCGTTCCTCGACCTGACACTCATTCAAA38927TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WMEJ 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds.
KT885090.1:38955-38975
AGTCGTTCCTCGACCTGACACTCATTCAAA38955TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis sativus cultivar WNE F8 1-aminocyclopropane-1-carboxylate synthase, hypothetical protein, DNA binding / transcription factor, and branched-chain amino acid aminotransferase genes, complete cds
KT885091.1:39051-39071
AGTCGTTCCTCGACCTGACACTCATTCAAA39051TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:4501037-4501057
AGTCGTTCCTCAACCTGACACCCATTCAAA4501037TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Cucumis melo genomic chromosome, chr_8.
LN713262.1:4501037-4501057
AGTCGTTCCTCAACCTGACACCCATTCAAA4501037TCAGTGCCCACTTCTCTCGTCTTTTTATCACAATCCATTATTTTACCAAGA
Citrullus colocynthis genome assembly, chromosome: 4.
OZ021738.1:29013075-29013095
AGTCGTTCCTCAACCTGACACTCATTCAAA29013075TCAGTGCCCACTTCTCTCGTCTTTTTATCAAAATCCATTATTTTACAAAGA
Cucumis sativus gynoecious line (FF) branched-chain amino acid transaminase (BCAT) gene, exons 8 through 10 and partial cds.
DQ839407.1:1225-1245
TCTTGGTAAAATAATGGATTGTGATAAAAA1225GACGAGAGAAGTGGGCACTGATTTGAATGAGTGTCAGGTCGAGGAACGACT
Cucumis sativus branched-chain amino acid transaminase (BCAT) gene, exons 8 through 10 and partial cds.
DQ839408.2:1772-1792
TCTTGGTAAAATAATGGATTGTGATAAAAA1772GACGAGAGAAGTGGGCACTGATTTGAATGAGTGTCAGGTCGAGGAACGACT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCAGTGCCCACTTCTCTCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCAGTGCCCACTTCTCTCGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.399 | 0.390 | search_plus_done; http://172.18.8.135:50800/match?q=TCAGTGCCCACTTCTCTCGTC&k=0&no_gap=0&offset=0&limit=50
0.583 | 0.184 | search_minus_done; http://172.18.8.135:50800/match?q=GACGAGAGAAGTGGGCACTGA&k=0&no_gap=0&offset=0&limit=11
0.584 | 0.001 | cgi_end;

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