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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:33:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

SDSS2_11 SDSS2 Camellia sinensis var. sinensis cDNA clone P11 5', mRNA sequence.
GH710840.1:124-143
TCTCGTGATTGGCGGCCATTGAGCAGAGCT124TCATAACATAAGGAATAGGTATATATATGTATATGTGTATGTGTAGTGCG
Tea008_2005-10-27_1/Tea008_E05_020_1 Camellia sinensis (tea) cultivar DT1 EST library Camellia sinensis cDNA, mRNA sequence.
JK478812.1:78-97
TCTCGTGATTGGCGGCCATTGAGCAGAGCT78TCATAACATAAGGAATAGGTATATATATGTATATGTGTATGTGTAGTGCG
Avena insularis genome assembly, chromosome: 1C.
OU342338.1:363462833-363462852
CATCTTATTATGGAACTCTCTCTACACATG363462833TCATAACATAAGGAATAGGTTATCCTAATTATGATTAATTACAACATGCT
Avena sativa genome assembly, chromosome: 1C.
OU342385.1:410114715-410114734
CATCTTATTATGGAACTCTCTCTACACATG410114715TCATAACATAAGGAATAGGTTATCCTAATTATGATTAATTACAACATTCT
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:466344203-466344222
CATCTTATTATGGAGCTCTCTCCACACATA466344203TCATAACATAAGGAATAGGTTATCCTAATCATTCCTAATTTTTCCATGCT
Avena sativa genome assembly, chromosome: 8.
OV702286.1:449035070-449035089
CATCTTATTATGGAACTCTCTCTACACATG449035070TCATAACATAAGGAATAGGTTATCCTAATTATGATTAATTACAACATTCT
Hecatera dysodea genome assembly, chromosome: 5.
HG995291.1:9949353-9949372
TATATACGGAGACTGAATGGAGTTTTGTTA9949353TCATAACATAAGGAATAGGTAGCTTTTAGATTTATTTACGTGTCTGACTT
Acleris holmiana genome assembly, chromosome: 8.
OX438770.1:5260235-5260254
CTTGAGAATTTCCACTGAAGAGCAATAAGC5260235TCATAACATAAGGAATAGGTATACAGTTTGCACTGTCAACTTTGAGGATT
Helleia helle genome assembly, chromosome: 6.
OY971419.1:15834854-15834873
AAAACTTCTGTTAACTCAAGGAGAACTTAA15834854TCATAACATAAGGAATAGGTCTATATTGTCTGAAATTAATAACTACAAAA
Avena insularis genome assembly, chromosome: 7C.
OU342344.1:450587653-450587672
ATCATGGAATAATTATGAATGATTAGAATA450587653ACCTATTCCTTATGTTATGATATATGTGGAGAGAGCCCCATAATAAGATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATAACATAAGGAATAGGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATAACATAAGGAATAGGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.350 | 0.342 | search_plus_done; http://172.18.8.135:50400/match?q=TCATAACATAAGGAATAGGT&k=0&no_gap=0&offset=0&limit=50
0.453 | 0.102 | search_minus_done; http://172.18.8.135:50400/match?q=ACCTATTCCTTATGTTATGA&k=0&no_gap=0&offset=0&limit=41
0.453 | 0.001 | cgi_end;

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