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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-06 04:53:14, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum lycopersicum chromosome 6 clone C06HBa0002C17, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC211019.1:39786-39805
CTTTGAATAAACAATCAAGAACCGACCACT39786TCATCACCAAATCTCCATCGGTAACAACAGCCAAACAACCTCTAAACACC
Solanum lycopersicum chromosome 6 clone C06HBa0128E05, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC211052.1:40055-40074
CTTTGAATAAACAATCAAGAACCGACCACT40055TCATCACCAAATCTCCATCGGTAACAACAGCCAAACAACCTCTAAACACC
Oryza longiglumis cultivar IRGC 106525 chromosome 4_HH.
CP143121.1:51791868-51791887
GCGCAATTTGGTCTCCAGAACCTGTTGTCT51791868TCATCACCAAATCTCCATCGGCTCCCGTCGTTCTCTACTGCTTGCAATGG
Oryza ridleyi isolate KAUST chromosome 3_HH.
CP161324.1:71887967-71887986
GTGCAATTTGGTCTCCAGAACTCGTCGTCT71887967TCATCACCAAATCTCCATCGGCTCCCGCCGTTTTCTGTTGCTTGCAATGG
Tripolium pannonicum genome assembly, chromosome: 6.
OZ219255.1:175742326-175742345
AACCATATCTTAAGTATTTCTAAACTATTG175742326TCATCACCAAATCTCCATCGTTTACATTAGGACTCAACCATCTCCACCTA
CNMM14644.b1_G13.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNMM14644, mRNA sequence.
EH728194.1:314-333
TGCCGAGACGCTTAGTCGGTTGGGGGTTGC314CGATGGAGATTTGGTGATGATGGTTTCGAATCATTCTTCTTCTTCTTCTT
Solanum virginianum mRNA, clone: SmFL06I06, 5'end.
FS070505.1:417-436
TTCTGACAAACTGAGTGCTCTAGGTGTTGG417CGATGGAGATTTGGTGATGATGGTGTCTAATGCAACATCCCTTTCTAGTG
Solanum virginianum mRNA, clone: SmFL15M08, 5'end.
FS076882.1:450-469
TTCTGACAAACTGAGTGCTCTAGGTGTTGG450CGATGGAGATTTGGTGATGATGGTGTCTAATGCAACATCCCTTTCTAGTG
Solanum torvum mRNA, clone: TVR19J02, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS115785.1:508-527
TTCTGACAAACTGAGTGCTCTAGGTGTTGG508CGATGGAGATTTGGTGATGATGGTGTCTAGTGCAACGTCCCTTTCTA
Solanum lycopersicum chromosome 6 clone C06HBa0023D12, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces.
AC211025.1:43853-43872
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC43853CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAG
Solanum lycopersicum Micro-Tom DNA, chromosome 6, draft genome sequence.
AP028940.1:46174791-46174810
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC46174791CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAG
Solanum cheesmaniae LA0166 DNA, chromosome 6, nearly complete sequence.
AP038855.1:45954870-45954889
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC45954870CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAA
Solanum lycopersicum cultivar I-3 chromosome 6.
CP023762.1:43708143-43708162
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC43708143CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAG
Oryza ridleyi isolate KAUST chromosome 1_HH.
CP161320.1:65215137-65215156
GGTGTCGCCATTGCGGAGCACGGCGGGAGA65215137CGATGGAGATTTGGTGATGAGGACGACGGATTCTAGTGATCAGATTATGC
Oryza ridleyi isolate KAUST chromosome 7_JJ.
CP161333.1:34290900-34290919
CCATTGCAAGTAGCAGAGAACGGCGGGAGC34290900CGATGGAGATTTGGTGATGAGGACGACGGGTTCTGGAGACCAAATTGTGC
Solanum lycopersicum chromosome ch06, complete genome.
HG975518.1:40097636-40097655
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC40097636CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAG
Avena byzantina genome assembly, chromosome: 5D.
OU342375.1:36354871-36354890
TCACTCATGGATGAGGGAAACATTGATGGT36354871CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OU342396.1:33294620-33294639
TCACTCATGGATGAGGGAAACATTGATGGT33294620CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Solanum lycopersicum genome assembly, chromosome: 6.
OU640349.1:46190392-46190411
GGTGTTTAGAGGTTGTTTGGCTGTTGTTAC46190392CGATGGAGATTTGGTGATGAAGTGGTCGGTTCTTGATTGTTTATTCAAAG
Avena sativa genome assembly, chromosome: 19.
OV702297.1:31171198-31171217
TCACTCATGGATGAGGGAAACATTGATGGT31171198CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena magna genome assembly, chromosome: 5D.
OX371346.1:32476611-32476630
TCACTCATGGATGAGGGAAACATTGATGGT32476611CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371367.1:33998967-33998986
TCACTCATGGATGAGGGAAACATTGATGGT33998967CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371388.1:33938317-33938336
TCACTCATGGATGAGGGAAACATTGATGGT33938317CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena fatua genome assembly, chromosome: 5D.
OX371409.1:32344287-32344306
TCACTCATGGATGAGGGAAACATTGATGGT32344287CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371454.1:32514581-32514600
TCACTCATGGATGAGGGAAACATTGATGGT32514581CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371475.1:32726788-32726807
TCACTCATGGATGAGGGAAACATTGATGGT32726788CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371496.1:32662481-32662500
TCACTCATGGATGAGGGAAACATTGATGGT32662481CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371517.1:32347853-32347872
TCACTCATGGATGAGGGAAACATTGATGGT32347853CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371538.1:33555967-33555986
TCACTCATGGATGAGGGAAACATTGATGGT33555967CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371559.1:32932500-32932519
TCACTCATGGATGAGGGAAACATTGATGGT32932500CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371580.1:31902311-31902330
TCACTCATGGATGAGGGAAACATTGATGGT31902311CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371601.1:32739752-32739771
TCACTCATGGATGAGGGAAACATTGATGGT32739752CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371622.1:32774665-32774684
TCACTCATGGATGAGGGAAACATTGATGGT32774665CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371643.1:33545742-33545761
TCACTCATGGATGAGGGAAACATTGATGGT33545742CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371664.1:32372893-32372912
TCACTCATGGATGAGGGAAACATTGATGGT32372893CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371685.1:31989337-31989356
TCACTCATGGATGAGGGAAACATTGATGGT31989337CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371706.1:33954577-33954596
TCACTCATGGATGAGGGAAACATTGATGGT33954577CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371727.1:32604082-32604101
TCACTCATGGATGAGGGAAACATTGATGGT32604082CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371748.1:35072011-35072030
TCACTCATGGATGAGGGAAACATTGATGGT35072011CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX371769.1:32873163-32873182
TCACTCATGGATGAGGGAAACATTGATGGT32873163CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sterilis genome assembly, chromosome: 5D.
OX371856.1:34679774-34679793
TCACTCATGGATGAGGGAAACATTGATGGT34679774CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sterilis genome assembly, chromosome: 5D.
OX371877.1:34856473-34856492
TCACTCATGGATGAGGGAAACATTGATGGT34856473CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX637736.1:32783618-32783637
TCACTCATGGATGAGGGAAACATTGATGGT32783618CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX637757.1:34861584-34861603
TCACTCATGGATGAGGGAAACATTGATGGT34861584CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OX637778.1:32788430-32788449
TCACTCATGGATGAGGGAAACATTGATGGT32788430CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Avena sativa genome assembly, chromosome: 5D.
OZ077678.1:31171198-31171217
TCACTCATGGATGAGGGAAACATTGATGGT31171198CGATGGAGATTTGGTGATGAAGATGATGATGATCCTCTCCAAATTCCTCG
Geotrypetes seraphini genome assembly, chromosome: 8.
LR699153.1:12376382-12376401
TCAGGCAAAGGTGTCGATAAATAATGGTGG12376382CGATGGAGATTTGGTGATGAGATTGCTGGTGTTCTTGGAAGTGATTTTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TCATCACCAAATCTCCATCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TCATCACCAAATCTCCATCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.334 | 0.324 | search_plus_done; http://172.18.8.135:50900/match?q=TCATCACCAAATCTCCATCG&k=0&no_gap=0&offset=0&limit=50
1.062 | 0.728 | search_minus_done; http://172.18.8.135:50900/match?q=CGATGGAGATTTGGTGATGA&k=0&no_gap=0&offset=0&limit=45
1.090 | 0.028 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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